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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57223.1
DDBJ      :             TRAP dicarboxylate transporter, DctM subunit
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  320/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
:442 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   19->426 PF06808 * DctM 2e-58 42.5 %
:HMM:PFM   9->426 PF06808 * DctM 1.1e-108 38.3 410/416  
:BLT:SWISS 54->434 SIAT1_HAEIN 1e-28 29.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57223.1 GT:GENE ABA57223.1 GT:PRODUCT TRAP dicarboxylate transporter, DctM subunit GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(768109..769437) GB:FROM 768109 GB:TO 769437 GB:DIRECTION - GB:PRODUCT TRAP dicarboxylate transporter, DctM subunit GB:PROTEIN_ID ABA57223.1 GB:DB_XREF GI:76882542 InterPro:IPR004681 InterPro:IPR010656 LENGTH 442 SQ:AASEQ MEVWALVMFAVLFALLLLGYPVAFTLGGVALAFGAIFLDMDFFRLLPLRIWGIMTNFTLLAVPLFVFMGVILEKSGLAEDLLETMGLLFGRLRGGLGISIVVVGALLAATTGVVGATVVTMGIIALPSMLKHGYAKELATGTIASAGTLGQIIPPSIVLILLGDVMGVAVGQLFMAAVVPGVLLILLYIFHIAITAWRRPEAAPALNRVVSQGNPSLGRRVAKSLIPPLTLVIAVLGSIFFGIASPTESAAVGALGAILLALWHRRLTLANLHAASAQTVRLTSMVFIILIGATAFGLVFRGMGGDTLVLELMTGLPGGSWTFLALSMLLIFLLGFFLDFLEICFIVVPILTPVAIHLGLNPLWFAVLIALNLQTSFLTPPFGFSLFYLKAVAPPEVHITHLYRGILPFVAIQLITLALLLVFPEIGLWLPTTMDRLQGMGG GT:EXON 1|1-442:0| BL:SWS:NREP 1 BL:SWS:REP 54->434|SIAT1_HAEIN|1e-28|29.6|372/616| TM:NTM 12 TM:REGION 2->24| TM:REGION 29->51| TM:REGION 56->78| TM:REGION 102->124| TM:REGION 139->161| TM:REGION 173->195| TM:REGION 223->245| TM:REGION 252->274| TM:REGION 281->303| TM:REGION 323->345| TM:REGION 352->374| TM:REGION 406->428| SEG 5->18|alvmfavlfallll| SEG 86->97|gllfgrlrgglg| SEG 101->120|vvvgallaattgvvgatvvt| SEG 250->262|aavgalgaillal| SEG 323->341|flalsmllifllgffldfl| RP:PFM:NREP 1 RP:PFM:REP 19->426|PF06808|2e-58|42.5|400/412|DctM| HM:PFM:NREP 1 HM:PFM:REP 9->426|PF06808|1.1e-108|38.3|410/416|DctM| OP:NHOMO 875 OP:NHOMOORG 324 OP:PATTERN ------------------------------------------------------------1------- -------11121-------------1------------------1-1-------1-----------1---1---------------------------------1---1-------------------------1111111-----111-11--------1-1-1--11-1-1-----1-------2211-------------------4111---------3-----------------------------------------------------------------------------------------------------3------------------------1--11--24-2-1--2------1-----11--------B771136345511111111115-22222313812-24413366329874212GFB98CDF9J--------1----421-----------------------------3-----2JE7H1-----1----112------2--1425213---7344432F7B53231---12--------1-364-1D26464--4222-1211-111-1111---2-22-1-------1-------12311------314-3-A21111-1-111111--114---1212------21--11----2-22211--1-1222-2--11-----4----111-2-21211222212111----111---111111111111---1----------16CL---212-1111-223-------11-112222-1-15---14-1----------2--123333332435--11-11---------2-11---------------------------------------------11111--- --------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1--------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 203-213, 441-442| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc //