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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57227.1
DDBJ      :             succinyl-CoA synthetase (ADP-forming) beta subunit
Swiss-Prot:             

Homologs  Archaea  55/68 : Bacteria  673/915 : Eukaryota  189/199 : Viruses  0/175   --->[See Alignment]
c.23.4d.142.1
:389 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->376 1jkjB PDBj 3e-93 51.6 %
:RPS:PDB   1->376 1cqjB PDBj 1e-46 50.0 %
:RPS:SCOP  1->237 1eucB2  d.142.1.4 * 7e-65 30.4 %
:RPS:SCOP  242->376 1cqiB1  c.23.4.1 * 2e-34 66.7 %
:HMM:SCOP  1->238 1eucB2 d.142.1.4 * 9e-75 48.1 %
:HMM:SCOP  239->386 1eucB1 c.23.4.1 * 1.9e-52 57.4 %
:RPS:PFM   3->203 PF08442 * ATP-grasp_2 6e-39 43.9 %
:RPS:PFM   264->360 PF00549 * Ligase_CoA 2e-25 57.7 %
:HMM:PFM   3->203 PF08442 * ATP-grasp_2 9.1e-76 51.7 201/202  
:HMM:PFM   262->382 PF00549 * Ligase_CoA 1.9e-29 34.7 121/153  
:BLT:SWISS 1->376 SUCC_ACIF5 e-106 53.5 %
:PROS 243->260|PS00368|RIBORED_SMALL
:PROS 257->282|PS01217|SUCCINYL_COA_LIG_3
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57227.1 GT:GENE ABA57227.1 GT:PRODUCT succinyl-CoA synthetase (ADP-forming) beta subunit GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 771472..772641 GB:FROM 771472 GB:TO 772641 GB:DIRECTION + GB:PRODUCT succinyl-CoA synthetase (ADP-forming) beta subunit GB:PROTEIN_ID ABA57227.1 GB:DB_XREF GI:76882546 InterPro:IPR000358 InterPro:IPR003135 InterPro:IPR005809 InterPro:IPR005811 LENGTH 389 SQ:AASEQ MILHEFQAKCLFSDYGIPVPSGGPAGSVEEARAWARKLGGERWVVKAQIHAGGRGKAGGVRVVSSAEELSGFCSHLLGTRLVTAQTDAAGLPVQSLLVEQPAAIAREFYLAATLDRQLERVVIMASSRGGVDIEQVAAKYPGEILRLAVHPIVGLQPYQCRRVGFAFGLTSEQRRQLVQIMEKMYRLFLERDANLVEMNPLVVTEQGDLLALDAKVVLDDNAAFRHAAWEALRDPTQENQKEVEARTHGLSYIALEGDIACMVNGAGLAMATMDLIKLQKGEPANFLDVGGTATAERVTEAFKLILTDTKVKSILVNIFGGIVRCDLIAEGIIQAMQEVEIQLPVVVRLEGTNAKQGRTLLRESGMKLITADNLTDAARKAVAAAGERA GT:EXON 1|1-389:0| BL:SWS:NREP 1 BL:SWS:REP 1->376|SUCC_ACIF5|e-106|53.5|376/387| PROS 243->260|PS00368|RIBORED_SMALL|PDOC00317| PROS 257->282|PS01217|SUCCINYL_COA_LIG_3|PDOC00335| SEG 51->66|aggrgkaggvrvvssa| SEG 208->223|dllaldakvvlddnaa| SEG 377->388|aarkavaaager| BL:PDB:NREP 1 BL:PDB:REP 1->376|1jkjB|3e-93|51.6|376/388| RP:PDB:NREP 1 RP:PDB:REP 1->376|1cqjB|1e-46|50.0|376/385| RP:PFM:NREP 2 RP:PFM:REP 3->203|PF08442|6e-39|43.9|198/199|ATP-grasp_2| RP:PFM:REP 264->360|PF00549|2e-25|57.7|97/127|Ligase_CoA| HM:PFM:NREP 2 HM:PFM:REP 3->203|PF08442|9.1e-76|51.7|201/202|ATP-grasp_2| HM:PFM:REP 262->382|PF00549|1.9e-29|34.7|121/153|Ligase_CoA| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00549|IPR005811| GO:PFM GO:0008152|"GO:metabolic process"|PF00549|IPR005811| RP:SCP:NREP 2 RP:SCP:REP 1->237|1eucB2|7e-65|30.4|237/246|d.142.1.4| RP:SCP:REP 242->376|1cqiB1|2e-34|66.7|135/147|c.23.4.1| HM:SCP:REP 1->238|1eucB2|9e-75|48.1|235/0|d.142.1.4|1/1|Glutathione synthetase ATP-binding domain-like| HM:SCP:REP 239->386|1eucB1|1.9e-52|57.4|148/0|c.23.4.1|1/1|Succinyl-CoA synthetase domains| OP:NHOMO 1196 OP:NHOMOORG 917 OP:PATTERN 111111111111111111111112111111111111111111111111-----1-------1111-11 111111-1111---11111-11111111111111111111111111111111111111--111111122111111111----121111111------11111111111111111111111111112222212221111111---11-11-111----------11--1111------------11111---1111111111111121111111111111111111------1111111111111111111111-----------------------------------------------------------------------11-------------------------1--1-33--1--111-------1-1111111111111111131111211111111111-332222221211111111211111121112111111312--------111-2111111111111111111111111111111111111111111111111111111111311111111111121111122111111121111111111111111122211111111111-11111-32313141111211121--11111111----------11111111111111111111111111111111111111111111------21111111112122211-11111221111211111121111111111111111111111111111111111111111111111111111111111121111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111-111111------------------------------------1---1-1---111 11--222-311-11122222333323222222222222221222221222231311222222111111-11111111-1111-11111-11121111111112112-21343421332222222241A1AU3-5232222322222222222231324224422222326422231111C1111111222111111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 376 STR:RPRED 96.7 SQ:SECSTR ccccHHHHHHHHHHTTcccccEEEEccHHHHHHHHHHHccccEEEEEccccccTcccccEEEEccHHHHHHHHHHHTTcEEccTTcccccEEcccEEEEEcccEEEEEEEEEEEETTTTEEEEEEEccTTccHHHHHHHcGGGEEEEEccTTTcccHHHHHHHHHHTTccTHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEETTccEEEcccEEEEcGGGGGGcHHHHHTccGGGccHHHHHHHHTTEEEEEccccEEEEEccHHHHHHHHHHHHHTTccccEEEEEcccccHHHHHHHHHHHTTcTTccEEEEEEEcccccHHHHHHHHHHHHHHHTccccEEEEEEcTTHHHHHHHHHHTcccEEEcccHHH############# DISOP:02AL 387-389| PSIPRED ccccHHHHHHHHHHccccccccEEEccHHHHHHHHHHcccccEEEEcccccccccccccEEEcccHHHHHHHHHHHHcccEEEEcccccccEEcEEEEEEcccccEEEEEEEEEccccccEEEEEEccccccccHHHHHcccccccHHccHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccEEEcccEEEcccccEEEEEEEEEEccccccccccHHHHcccccccHHHHHHHHccccEEcccccEEEEEccHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHccccccEEEEEEccccccHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHccccEEEEccHHHHHHHHHHHHHccc //