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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57268.1
DDBJ      :             TPR repeat protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  81/915 : Eukaryota  45/199 : Viruses  0/175   --->[See Alignment]
a.118.8b.69.9c.87.1
:730 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   21->144 2fo7A PDBj 3e-08 29.1 %
:BLT:PDB   366->730 2vsyA PDBj 2e-16 26.5 %
:RPS:PDB   26->321 2c0mA PDBj 2e-12 14.9 %
:RPS:SCOP  18->291 1w3bA  a.118.8.1 * 2e-15 16.5 %
:RPS:SCOP  355->455 1k32A3  b.69.9.1 * 7e-04 21.8 %
:RPS:SCOP  567->710 1f0kA  c.87.1.2 * 4e-04 16.7 %
:HMM:SCOP  28->163 1a17A_ a.118.8.1 * 5.4e-20 32.6 %
:HMM:SCOP  176->291 1iygA_ a.118.8.1 * 3.8e-06 18.1 %
:HMM:SCOP  377->729 2iw1A1 c.87.1.8 * 6.9e-06 20.2 %
:RPS:PFM   557->621 PF07688 * KaiA 6e-04 37.1 %
:HMM:PFM   39->65 PF07719 * TPR_2 0.0002 33.3 27/34  
:HMM:PFM   94->111 PF07719 * TPR_2 0.00015 50.0 18/34  
:HMM:PFM   214->273 PF03704 * BTAD 0.00019 21.7 60/146  
:BLT:SWISS 72->709 SEC_ARATH 3e-16 23.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57268.1 GT:GENE ABA57268.1 GT:PRODUCT TPR repeat protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(821586..823778) GB:FROM 821586 GB:TO 823778 GB:DIRECTION - GB:PRODUCT TPR repeat protein GB:PROTEIN_ID ABA57268.1 GB:DB_XREF GI:76882587 InterPro:IPR001440 LENGTH 730 SQ:AASEQ MGIEKLLAKARQLQAANRVQEGTQIYRQILAKHPNHSIALLGLGNAALQNKDFTAAIQWLERLLAVIGPKRQLLTTLSMAHSNCGSRLFENVMLPQAHAHFRRALELDPRNRLAWRNLVLAQLQQGDNQAAVASARQASILDPRDHEIRLLLARALLANQQHPAGLGLLAILTNIPLPDEIALGVAEQWLLYHQPQRAWALLERQQNISADPKALISRIMILARRHGENWQAAQWLRRWLKRHSAQEKQWLAFARVLDRAGEARKAMTVYQHILTANPDAWQARLGAALTLPVVYHDRQHLATTRSRYRKELQALKEWQPASPPWLEDLLWSNFFLAYQGGNDASLQRDYGDWLHHWASHALDAPSPVRCKHSRPRRIGLVSSAFRDCTVGHYFGRWPEALGRGGFEVIVYQLGPKRDHHTRIVADSASKFRYLDGRLASCAAQIAADRLDALIYPELGMDARLLVLAALRLAPFQGCAWGHPVTSGLPTMDIYFSCATMEPPEARTHYRERLLSLPGLGTSYPAPPEPPPADRNDLGLPEKRTLYLLPQSPFKIHPDADALVAQLLAEDRQGMLVLFTGQDRRVTDKLLTRLGAALTQAGADPERQLLLLPTTSRARYLQINRCCDLMLDTPHWSGGNTALDALGSGLPLIALPSTYMRGRQSAAMLNLLELPELVAQDAGDYVRKVLQYGRDKAANQALRVRILARRNRLFDQQAPLDALTAFFKSLS GT:EXON 1|1-730:0| BL:SWS:NREP 1 BL:SWS:REP 72->709|SEC_ARATH|3e-16|23.7|621/977| SEG 5->16|kllakarqlqaa| SEG 39->48|allglgnaal| SEG 149->158|rlllaralla| SEG 462->473|arllvlaalrla| SEG 524->532|pappepppa| BL:PDB:NREP 2 BL:PDB:REP 21->144|2fo7A|3e-08|29.1|117/136| BL:PDB:REP 366->730|2vsyA|2e-16|26.5|358/547| RP:PDB:NREP 1 RP:PDB:REP 26->321|2c0mA|2e-12|14.9|281/297| RP:PFM:NREP 1 RP:PFM:REP 557->621|PF07688|6e-04|37.1|62/278|KaiA| HM:PFM:NREP 3 HM:PFM:REP 39->65|PF07719|0.0002|33.3|27/34|TPR_2| HM:PFM:REP 94->111|PF07719|0.00015|50.0|18/34|TPR_2| HM:PFM:REP 214->273|PF03704|0.00019|21.7|60/146|BTAD| GO:PFM:NREP 3 GO:PFM GO:0005515|"GO:protein binding"|PF07688|IPR011648| GO:PFM GO:0006468|"GO:protein amino acid phosphorylation"|PF07688|IPR011648| GO:PFM GO:0007623|"GO:circadian rhythm"|PF07688|IPR011648| RP:SCP:NREP 3 RP:SCP:REP 18->291|1w3bA|2e-15|16.5|267/388|a.118.8.1| RP:SCP:REP 355->455|1k32A3|7e-04|21.8|78/360|b.69.9.1| RP:SCP:REP 567->710|1f0kA|4e-04|16.7|144/351|c.87.1.2| HM:SCP:REP 28->163|1a17A_|5.4e-20|32.6|129/0|a.118.8.1|1/2|TPR-like| HM:SCP:REP 176->291|1iygA_|3.8e-06|18.1|116/133|a.118.8.1|3/3|TPR-like| HM:SCP:REP 377->729|2iw1A1|6.9e-06|20.2|337/0|c.87.1.8|1/1|UDP-Glycosyltransferase/glycogen phosphorylase| OP:NHOMO 198 OP:NHOMOORG 126 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------1-2---2------------112222614--1---11-12-4223---21--2------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------221-----11321---1--12--------------1---------1114--1-----13------1----2--------------5-2--------------------------------1---------------------------1------113---2--------1---3-111---------1---1----1-----1-----111-----------1--------------------------------------------------------------1---------11---1------------------------------------------------------------------------------------------1------------------------------------------------------------------------1111-11111-------------------------------------------------------------1- ------1-----------------------------------------------------------------------------------------------------3-111113-1--1-1----1------12----11531-----11------124111111--11--11----7-1--11--2--1--13113 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 703 STR:RPRED 96.3 SQ:SECSTR ################GTccccHHHcccccccTTTTcccHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHccHHcTTcHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHcTTcHHHHHHHHHHHHHTTcHHHHHHHHHHHHHccHHHHTTccTTTccccHHHHHHHHHHHHHHTTcTTcccHHHHHHHHHHHHHTcHHHHHHHHHHHHTTcTTcHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHcTTcHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHTcccTTTccccccHHHHHHHHHHHHHHHHHTcGGGHHHHHHTcHHHHHHHHHHHHHHHHHHHHHHHETcccTTccEEEEccHH####ccccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHcTTEEEEEEEcccccHHHHHHTcEEEEcTTccHHHH#HHHHHHTTccEEEEccccTTccccHHHHTccccEEEEEcccccccccTTccEEEEcTTTccTTTGGGcccEEEEccccccccTTccccccccTGGGTccTTccEEEEcccGGGccHHHHHHHHHHHHHcTTcEEEEEcccTTHHH#####HHHHHHHHTTccGGG#EEEEccccHHHHHHHGGGccEEEccccccccHHHHHHHHTTccEEccccccGGGcHHHHHHHHHTcGGGccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccTTcHHHHHHHHHHHHHHHH PSIPRED ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHccEEEEcccccHHHHHHHHHccccEEEEccccccccHHHHHHccccHHHHHHcccccccccccccEEEEccccccHHHHHHcccEEEEccccccccccccccccccHHHccccccEEEEEEccccccccHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHHHccccHHHEEEEcccccHHHHHHHHHcccEEEcccccccHHHHHHHHHHcccEEccccHHHHHHHHHHHHHHccccHHccccHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHc //