[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57271.1
DDBJ      :             General secretion pathway protein L
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  18/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.55.1
:373 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  53->190 2bh1A2 c.55.1.11 * 1.9e-13 25.0 %
:RPS:PFM   91->190 PF11104 * Competence_A 9e-06 26.0 %
:RPS:PFM   238->345 PF05137 * PilN 8e-04 27.9 %
:HMM:PFM   199->351 PF05137 * PilN 2.2e-21 27.2 151/162  
:HMM:PFM   100->191 PF11104 * Competence_A 4.8e-10 27.2 92/146  
:BLT:SWISS 31->364 GSPL_XANCP 6e-20 31.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57271.1 GT:GENE ABA57271.1 GT:PRODUCT General secretion pathway protein L GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 825919..827040 GB:FROM 825919 GB:TO 827040 GB:DIRECTION + GB:PRODUCT General secretion pathway protein L GB:PROTEIN_ID ABA57271.1 GB:DB_XREF GI:76882590 InterPro:IPR007813 LENGTH 373 SQ:AASEQ MSATKRQAKHQGKGTQIFSKEIVSSLNISSFLDWWGQGLLGCLPRRVRQWFWRETTSVVLEPQGSGVRVQRERGESKENLGFYEGAAQWDKILGEEDTVLVFRLPPRQVLSKSLVLPSAAEENLRQVLAFEMERHTPFTANQVYYDFAIRERNLAARRITVSLIVVPRRILDEWLERLSHWGLQPAVVDVAGADRGQTNLLPEEKRTSKVRPLPRLNMGLGLVLLLLVAGAILLPLWQARTVVIELMPQVAAAQQKAESVMAIRQQLEKVVEASAFLGKEKQEYPSAVELLYELTRILPDNVWLQQLTFSRGKAELDIRGEAAEASALIALLEVSPYFQSVQFRSPVTTNARTGRDRFHITAQIPKLEGLPLP GT:EXON 1|1-373:0| BL:SWS:NREP 1 BL:SWS:REP 31->364|GSPL_XANCP|6e-20|31.2|330/100| TM:NTM 2 TM:REGION 222->244| TM:REGION 321->341| SEG 213->236|lprlnmglglvllllvagaillpl| SEG 321->333|eaaeasalialle| RP:PFM:NREP 2 RP:PFM:REP 91->190|PF11104|9e-06|26.0|100/144|Competence_A| RP:PFM:REP 238->345|PF05137|8e-04|27.9|104/162|PilN| HM:PFM:NREP 2 HM:PFM:REP 199->351|PF05137|2.2e-21|27.2|151/162|PilN| HM:PFM:REP 100->191|PF11104|4.8e-10|27.2|92/146|Competence_A| HM:SCP:REP 53->190|2bh1A2|1.9e-13|25.0|132/0|c.55.1.11|1/1|Actin-like ATPase domain| OP:NHOMO 18 OP:NHOMOORG 18 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------1--------------------------------------1----1-1-1------------------------11-1-11---1111----------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-16, 253-270, 372-373| PSIPRED ccccHHHHHHcccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEccccEEEEEHHcccccccccccccHHHHHHHHHHccccEEEEEccccEEEEEEEEcccHHHHHHHHHHHHHHHcccccHHcEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccccccccHHHHHcccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccEEEEEEEEcccEEEEEEEEcccHHHHHHcccccccccccEEEccEEccccccccEEEEEEEEccccccccc //