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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57275.1
DDBJ      :             Protein of unknown function DUF820
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  27/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.52.1
:187 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  23->183 1wdjA  c.52.1.27 * 4e-19 16.6 %
:HMM:SCOP  1->184 1wdjA_ c.52.1.27 * 5.1e-14 25.6 %
:HMM:PFM   50->149 PF05685 * DUF820 1.8e-15 27.0 100/111  
:PROS 20->34|PS00678|WD_REPEATS_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57275.1 GT:GENE ABA57275.1 GT:PRODUCT Protein of unknown function DUF820 GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 830963..831526 GB:FROM 830963 GB:TO 831526 GB:DIRECTION + GB:PRODUCT Protein of unknown function DUF820 GB:PROTEIN_ID ABA57275.1 GB:DB_XREF GI:76882594 InterPro:IPR001680 InterPro:IPR008538 LENGTH 187 SQ:AASEQ MQVHKRHAFTAWEYHQMAAVGILREDDRVELWDGEILEMSPIGSRHAATVDRLTAWLSRELGGRAIVRVQSPIGLSRYSEPQPDLVLLKPRPDFYASAHPGPGDVWLLLEVAESSLEYDRDFKLPRYAEAGIVESWIVDLPGQRLWVYQQPVGRNYQSMREYEPSDSLSPQAFPSASLALREILECG GT:EXON 1|1-187:0| PROS 20->34|PS00678|WD_REPEATS_1|PDOC00574| HM:PFM:NREP 1 HM:PFM:REP 50->149|PF05685|1.8e-15|27.0|100/111|DUF820| RP:SCP:NREP 1 RP:SCP:REP 23->183|1wdjA|4e-19|16.6|157/186|c.52.1.27| HM:SCP:REP 1->184|1wdjA_|5.1e-14|25.6|176/0|c.52.1.27|1/1|Restriction endonuclease-like| OP:NHOMO 93 OP:NHOMOORG 27 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------2-------------------------------4----34856662-1---------1-84461---------------68---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1111---------------------------------1--1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2| PSIPRED ccccEEEEccHHHHHHHHHccccccccEEEEEccEEEEEccccccHHHHHHHHHHHHHHHccccEEEEEcccEEEcccccccccEEEEccccHHHcccccccccEEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEccccEEEEEEEcccccEEEEEEEccccEEEEccccccEEcHHHHHccc //