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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57280.1
DDBJ      :             PpiC-type peptidyl-prolyl cis-trans isomerase
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  508/915 : Eukaryota  85/199 : Viruses  0/175   --->[See Alignment]
a.223.1d.26.1
:304 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   148->247 1fjdA PDBj 2e-13 46.1 %
:RPS:PDB   132->266 2bjrB PDBj 6e-20 11.4 %
:RPS:SCOP  132->245 1f8aB2  d.26.1.1 * 1e-25 33.3 %
:HMM:SCOP  29->177 1m5yA1 a.223.1.2 * 9.3e-05 22.9 %
:HMM:SCOP  142->249 1m5yA3 d.26.1.1 * 5.6e-29 45.8 %
:RPS:PFM   152->245 PF00639 * Rotamase 1e-11 47.3 %
:HMM:PFM   152->245 PF00639 * Rotamase 4.1e-27 49.5 93/95  
:HMM:PFM   93->120 PF08016 * PKD_channel 0.00049 32.1 28/426  
:BLT:SWISS 71->288 CBF2_CAMJJ 7e-20 28.6 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57280.1 GT:GENE ABA57280.1 GT:PRODUCT PpiC-type peptidyl-prolyl cis-trans isomerase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 835319..836233 GB:FROM 835319 GB:TO 836233 GB:DIRECTION + GB:PRODUCT PpiC-type peptidyl-prolyl cis-trans isomerase GB:PROTEIN_ID ABA57280.1 GB:DB_XREF GI:76882599 InterPro:IPR000297 LENGTH 304 SQ:AASEQ MQVGFKSGITSILILSALVAFSARAAEPEEEVLIQYKDVVVTPADFQAELETIPEQYRANVAASGERIHQLLDKIFVYRVLAREAQEQGLDQNPEVQQELKLEKEEILGKARLRQLRQQALADNPDFETLARERYQANPEKYQQPERVKVSHILIKTEERSEEEAKKLAEKVRQLALTEEKPFSELALEYSEDPSLEKNKGDLGFIVKGVTTKPFEEAAFALEQPGEISPVVKSRFGFHIIRLEERQAPKTKSFEEVKERLVEKIRETHLNQVVQTHLNQIRNAEGIQMNREAWQKLKPTPSAH GT:EXON 1|1-304:0| BL:SWS:NREP 1 BL:SWS:REP 71->288|CBF2_CAMJJ|7e-20|28.6|210/273| COIL:NAA 28 COIL:NSEG 1 COIL:REGION 154->181| TM:NTM 1 TM:REGION 5->26| SEG 97->106|qqelklekee| SEG 111->122|arlrqlrqqala| BL:PDB:NREP 1 BL:PDB:REP 148->247|1fjdA|2e-13|46.1|89/104| RP:PDB:NREP 1 RP:PDB:REP 132->266|2bjrB|6e-20|11.4|132/350| RP:PFM:NREP 1 RP:PFM:REP 152->245|PF00639|1e-11|47.3|91/91|Rotamase| HM:PFM:NREP 2 HM:PFM:REP 152->245|PF00639|4.1e-27|49.5|93/95|Rotamase| HM:PFM:REP 93->120|PF08016|0.00049|32.1|28/426|PKD_channel| GO:PFM:NREP 1 GO:PFM GO:0016853|"GO:isomerase activity"|PF00639|IPR000297| RP:SCP:NREP 1 RP:SCP:REP 132->245|1f8aB2|1e-25|33.3|108/113|d.26.1.1| HM:SCP:REP 29->177|1m5yA1|9.3e-05|22.9|144/0|a.223.1.2|1/1|Triger factor/SurA peptide-binding domain-like| HM:SCP:REP 142->249|1m5yA3|5.6e-29|45.8|107/0|d.26.1.1|1/1|FKBP-like| OP:NHOMO 887 OP:NHOMOORG 598 OP:PATTERN -------------------------------------------111--------------------11 113-------------------------------------------------------------------------------1--1-----111--1-----11--2211---------------12111211131-11-----11------------------------------------------111-1133333433233345311---1433111-11112222211111111111111111-1111----------------------------------------------------------------------2221122222-2121-3222111-2-22---1-111-111-1-1112---11----111111221211121211211-1111-1-2-1221121221--111-11111111-1-1--111-11---111111111---1211------------1111-11--1111----------122111111111----11121111121-123321112233222411123343333344111111133343434121111111111144634542312413122111131111111-111111111111--121333122122111112222212122122---31-2------11111111111111111-1111111111111111111111111-11111111111111111-1111111-----------------2---------31122111-11-----1--111111111-22333432333222223222---------11111111111111122111111111111111-------11111111-----------------------------1----------- ----------1---1----11-1-------------1111111-------------1-1---1---------1----------1--11-111--1------1---1---1-22111111-112-32-31362-233-2-132211111111--121112122--122112211121--1------1--3-----2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 135 STR:RPRED 44.4 SQ:SECSTR ###################################################################################################################################EEEETTccccTTccccccGGGccccccEEEEETTEEEEEEEEETTEEEEEcEEETTEEEcccccEETccEEEEEEEHHHHTcccEEcccccTTTcccEEEEEEETTEEEEEEEETTTTEEEEEETTEEEEEEGGG###################################### DISOP:02AL 1-3, 55-65, 297-298, 300-304| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccEEccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccEEEEEEEEEccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccHHHccccccccccccccHHHHHHHHHccccccccccEEccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEcHHHHcccccccccc //