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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57289.1
DDBJ      :             dTDP-4-dehydrorhamnose reductase
Swiss-Prot:             

Homologs  Archaea  38/68 : Bacteria  564/915 : Eukaryota  110/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:295 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->295 1kbzA PDBj 1e-55 43.6 %
:RPS:PDB   5->294 1e7rA PDBj 1e-21 12.6 %
:RPS:SCOP  7->291 1vl0A  c.2.1.2 * 5e-69 34.4 %
:HMM:SCOP  1->297 1n2sA_ c.2.1.2 * 1.7e-96 48.8 %
:RPS:PFM   6->294 PF04321 * RmlD_sub_bind 6e-69 50.2 %
:HMM:PFM   7->293 PF04321 * RmlD_sub_bind 5.6e-106 48.7 279/287  
:BLT:SWISS 8->295 RFBD_SALTY 4e-55 43.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57289.1 GT:GENE ABA57289.1 GT:PRODUCT dTDP-4-dehydrorhamnose reductase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 847438..848325 GB:FROM 847438 GB:TO 848325 GB:DIRECTION + GB:PRODUCT dTDP-4-dehydrorhamnose reductase GB:PROTEIN_ID ABA57289.1 GB:DB_XREF GI:76882608 InterPro:IPR001509 InterPro:IPR005913 LENGTH 295 SQ:AASEQ MNSTQRRILLIGATGQVGWELQRTLAPLGEVFAPGRERLDLAQLDSIRPCLAETQPALIVNAAAYTAVDKAEEEPEQALAINGKAPGVLAETARQQGAAFIHYSTDYVFDGKKAAPYRESDTPRPLNVYGQTKLTGEQAIVAVGGAYLILRTSWVYGLRGHNFLLTMQRLAREREVLRVVDDQWGAPTWSRLIAEGTAQIIAQSWGHRQNYIPLQTGIYHLSCGEKTTWHGFAQTILTRLAQGAGSVAKLKAISAADYPTAARRPAFSCLDNTLARDTFGIQLPSWRTALELALS GT:EXON 1|1-295:0| BL:SWS:NREP 1 BL:SWS:REP 8->295|RFBD_SALTY|4e-55|43.6|282/299| SEG 169->180|rlarerevlrvv| BL:PDB:NREP 1 BL:PDB:REP 8->295|1kbzA|1e-55|43.6|282/298| RP:PDB:NREP 1 RP:PDB:REP 5->294|1e7rA|1e-21|12.6|285/314| RP:PFM:NREP 1 RP:PFM:REP 6->294|PF04321|6e-69|50.2|277/282|RmlD_sub_bind| HM:PFM:NREP 1 HM:PFM:REP 7->293|PF04321|5.6e-106|48.7|279/287|RmlD_sub_bind| GO:PFM:NREP 2 GO:PFM GO:0008831|"GO:dTDP-4-dehydrorhamnose reductase activity"|PF04321|IPR005913| GO:PFM GO:0045226|"GO:extracellular polysaccharide biosynthetic process"|PF04321|IPR005913| RP:SCP:NREP 1 RP:SCP:REP 7->291|1vl0A|5e-69|34.4|270/281|c.2.1.2| HM:SCP:REP 1->297|1n2sA_|1.7e-96|48.8|287/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 903 OP:NHOMOORG 712 OP:PATTERN 11----1222212121-1----1----1-1--111--1-1-1-11-1111111-1-1--111-11--- 1-11111111111111111-121111111111111111111112-11--111211---111---111--1-1111-111-111-1-11433211111--11111121222--------------11111111112122212---112223222--11111-11-1122231-1-1---1-1-1211--21---111111111111111111--11111----1-----1---1--------------------1--112111-1111111-1-1111111111111111-11-11-11--11111111111-1111111111111-22------11-2-----12-1--11-1-11-121211-1--1---11---1222-----11-112111121-----------1-2213222111-1111211112121122111111-1111-1111111121111112------------1111-1111111-------11--11111233233211112232111111232112111111111111111111211111111111111111112-1111111111111124311211111-11112------------------------11111212---1-22322222332213222222---11-1--------11---1---11-111--11-----1----11111-2--1----1111111111-1111--111111------------------------1111113-21--1-----------------111-22222222223222342221---------1-1--------1-111111111111111--11--2211----------------------------------------11--1--21 ----11--------1--111111111111-111---11111111-1-1111111-11-1111---------------------------121-1111111111111--4-41-1211----1112112-4C2-22311112111-11-111-11-1111----211-------12--1-5---1111111-1------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 294 STR:RPRED 99.7 SQ:SECSTR #ccEcEEEEEETTTcHHHHHHHHHHTTcTTEcccTTTccTTcHHHHHHHHHHHcccEEEEcccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHTTccEEEEccGGGccTTccccccGGGccGGGHHHHHHHHHHHHHHHHHHHHHEEEEEcEEEcTTccccTTcccHHHHHHHHHHHHHHHTccEEEcEEEHHHHHHHHHHHHHcccccTcHHHHHHTccTTcccEEEcccccEEHHHHHHHHHHHHTcccEEEEETTccccccccccccHHHHHTTccccccHHHHHHHHHH DISOP:02AL 1-3| PSIPRED ccccccEEEEEccccHHHHHHHHHHHHcccEEEEcccccccccHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEEcccEEcccccccHHHHHHHHHccccEEEEEcccccEEEHHHHHHHHHHHHHHHHHHHHccccccccEEEEcccccccHHHHHHHHHHHHHHHccccccEEEccHHHccccccccccccccHHHHHHHcccccccHHHHHHHHHc //