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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57321.1
DDBJ      :             SSU ribosomal protein S2P
Swiss-Prot:RS2_NITOC    RecName: Full=30S ribosomal protein S2;

Homologs  Archaea  0/68 : Bacteria  909/915 : Eukaryota  132/199 : Viruses  0/175   --->[See Alignment]
c.23.15
:269 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->226 2gy9B PDBj 1e-80 62.9 %
:RPS:PDB   3->227 3bbnB PDBj 1e-74 44.0 %
:RPS:SCOP  6->225 1fjgB  c.23.15.1 * 1e-88 50.5 %
:HMM:SCOP  6->242 1fjgB_ c.23.15.1 * 5.4e-94 54.0 %
:RPS:PFM   9->223 PF00318 * Ribosomal_S2 6e-70 59.7 %
:HMM:PFM   9->225 PF00318 * Ribosomal_S2 4.6e-85 51.7 211/211  
:HMM:PFM   226->259 PF04568 * IATP 0.00084 20.6 34/100  
:BLT:SWISS 1->269 RS2_NITOC e-133 100.0 %
:PROS 6->17|PS00962|RIBOSOMAL_S2_1
:PROS 158->182|PS00963|RIBOSOMAL_S2_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57321.1 GT:GENE ABA57321.1 GT:PRODUCT SSU ribosomal protein S2P GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 881441..882250 GB:FROM 881441 GB:TO 882250 GB:DIRECTION + GB:PRODUCT SSU ribosomal protein S2P GB:PROTEIN_ID ABA57321.1 GB:DB_XREF GI:76882640 InterPro:IPR001865 InterPro:IPR005706 LENGTH 269 SQ:AASEQ MANVTMRQMLEAGVHFGHQARYWNPKMAPYIFGKRNNIHIINLEETLPLYMEATNYLGRLAANKGTVLFVGTKRAAQEPVREEAGRCGMPYVNSRWLGGMLTNFQTVRRSIKRLHDLEAMIQDGSLDRLKKREALTVRRDRDKLENNLGGIKNMTHLPDALFVIDVEHERIAVDEAAKLGIPVVAVVDTNSDPRKADYIIPGNDDAIRAIRLYLRGIADGIIDGRTTAAAASASKASKDEFVEMEEASEEETLTESLSEKSASTDASVT GT:EXON 1|1-269:0| SW:ID RS2_NITOC SW:DE RecName: Full=30S ribosomal protein S2; SW:GN Name=rpsB; OrderedLocusNames=Noc_0808; SW:KW Complete proteome; Ribonucleoprotein; Ribosomal protein. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->269|RS2_NITOC|e-133|100.0|269/269| GO:SWS:NREP 2 GO:SWS GO:0030529|"GO:ribonucleoprotein complex"|Ribonucleoprotein| GO:SWS GO:0005840|"GO:ribosome"|Ribosomal protein| PROS 6->17|PS00962|RIBOSOMAL_S2_1|PDOC00744| PROS 158->182|PS00963|RIBOSOMAL_S2_2|PDOC00744| SEG 228->238|aaaasaskask| SEG 243->263|emeeaseeetlteslseksas| BL:PDB:NREP 1 BL:PDB:REP 6->226|2gy9B|1e-80|62.9|221/236| RP:PDB:NREP 1 RP:PDB:REP 3->227|3bbnB|1e-74|44.0|225/231| RP:PFM:NREP 1 RP:PFM:REP 9->223|PF00318|6e-70|59.7|211/212|Ribosomal_S2| HM:PFM:NREP 2 HM:PFM:REP 9->225|PF00318|4.6e-85|51.7|211/211|Ribosomal_S2| HM:PFM:REP 226->259|PF04568|0.00084|20.6|34/100|IATP| GO:PFM:NREP 4 GO:PFM GO:0003735|"GO:structural constituent of ribosome"|PF00318|IPR001865| GO:PFM GO:0005622|"GO:intracellular"|PF00318|IPR001865| GO:PFM GO:0005840|"GO:ribosome"|PF00318|IPR001865| GO:PFM GO:0006412|"GO:translation"|PF00318|IPR001865| RP:SCP:NREP 1 RP:SCP:REP 6->225|1fjgB|1e-88|50.5|220/237|c.23.15.1| HM:SCP:REP 6->242|1fjgB_|5.4e-94|54.0|237/0|c.23.15.1|1/1|Ribosomal protein S2| OP:NHOMO 1055 OP:NHOMOORG 1041 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-11111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111121111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111 ------1-----11111111111111111111111111111111111111111111111-111111111111111111111--11111-11-1-11---1111111-12-211112--11--1-11-2-341-1-21-1---111--------1111-111-1111-11----112---------111-1-1------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 241 STR:RPRED 89.6 SQ:SECSTR ccccccHHHHHTccccccccccccGGGGGGEEEEETTEEEEcHHHHHHHTHHHHHHcHHHHTTTccEEEEcccTTTHHHHHHHHHHHTcEEccccccccccccHHHHHHHHHHHHHHHHcTTcTTTTTccHHHHHHHHHHHHHHTTcTTcTTcccccccEEEEccTTTTHHHHHHHHTTTccEEEccccccccccccEEcccccccHHHHHHHHHHHHHHHHHTcccccccccccccGGGG############################ DISOP:02AL 225-269| PSIPRED cccccHHHHHHccccccccEEEEcccccEEEEEEEccEEEEEHHHHHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHcccEEccccccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHccccEEEEEEcccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHccHHHHcccccHHcccccccHHHccHHHHHHHcccccccccc //