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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57356.1
DDBJ      :             sohB peptidase. Serine peptidase. MEROPS family S49
Swiss-Prot:             

Homologs  Archaea  19/68 : Bacteria  557/915 : Eukaryota  17/199 : Viruses  0/175   --->[See Alignment]
c.14.1
:325 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   122->284 3bf0D PDBj 2e-10 25.9 %
:RPS:PDB   92->300 3bezA PDBj 7e-29 23.0 %
:RPS:SCOP  87->279 1tg6A1  c.14.1.1 * 7e-07 13.0 %
:HMM:SCOP  73->284 1tyfA_ c.14.1.1 * 2.6e-27 28.6 %
:RPS:PFM   3->143 PF08496 * Peptidase_S49_N 1e-21 46.4 %
:RPS:PFM   145->288 PF01343 * Peptidase_S49 1e-21 37.8 %
:HMM:PFM   3->143 PF08496 * Peptidase_S49_N 1.3e-50 52.5 141/155  
:HMM:PFM   147->294 PF01343 * Peptidase_S49 2.6e-43 37.2 148/154  
:BLT:SWISS 88->310 SOHB_HAEIN 2e-69 53.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57356.1 GT:GENE ABA57356.1 GT:PRODUCT sohB peptidase. Serine peptidase. MEROPS family S49 GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(920859..921836) GB:FROM 920859 GB:TO 921836 GB:DIRECTION - GB:PRODUCT sohB peptidase. Serine peptidase. MEROPS family S49 GB:PROTEIN_ID ABA57356.1 GB:DB_XREF GI:76882675 InterPro:IPR002142 LENGTH 325 SQ:AASEQ MSELLSEYGLFLAKTLTIVILIALLIRSSISSKSRVQAAEKLEIKHLNKYYERMTRTLMMHLMPKKEFVKKLKSEKAHKNKQKYTKRVFVLDFHGDIRATAVASLREEITAVLSVATPEDEILLRLESGGGLVHEYGLAASQLERIRKKQIPLIIAVDKIAASGGYMMACVGNRIIAAPFAIIGSIGALMQVPNFHRLLDKHGIDFEQIKAGELKRTVTLFGINTDQDRELAKKQVEDIHQLFKEFVARYRPDMDLSQTATGQHWHAIQAKKLNLIDDLETSDDYLAEACKTANLYKVTYTVKKTFAERFLARTQAASDRTLGPF GT:EXON 1|1-325:0| BL:SWS:NREP 1 BL:SWS:REP 88->310|SOHB_HAEIN|2e-69|53.4|223/353| TM:NTM 1 TM:REGION 8->30| SEG 12->34|laktltiviliallirssissks| SEG 65->76|kkefvkklksek| BL:PDB:NREP 1 BL:PDB:REP 122->284|3bf0D|2e-10|25.9|162/476| RP:PDB:NREP 1 RP:PDB:REP 92->300|3bezA|7e-29|23.0|204/465| RP:PFM:NREP 2 RP:PFM:REP 3->143|PF08496|1e-21|46.4|138/155|Peptidase_S49_N| RP:PFM:REP 145->288|PF01343|1e-21|37.8|143/153|Peptidase_S49| HM:PFM:NREP 2 HM:PFM:REP 3->143|PF08496|1.3e-50|52.5|141/155|Peptidase_S49_N| HM:PFM:REP 147->294|PF01343|2.6e-43|37.2|148/154|Peptidase_S49| GO:PFM:NREP 4 GO:PFM GO:0004252|"GO:serine-type endopeptidase activity"|PF08496|IPR013703| GO:PFM GO:0005886|"GO:plasma membrane"|PF08496|IPR013703| GO:PFM GO:0006508|"GO:proteolysis"|PF01343|IPR002142| GO:PFM GO:0008233|"GO:peptidase activity"|PF01343|IPR002142| RP:SCP:NREP 1 RP:SCP:REP 87->279|1tg6A1|7e-07|13.0|161/184|c.14.1.1| HM:SCP:REP 73->284|1tyfA_|2.6e-27|28.6|175/183|c.14.1.1|1/1|ClpP/crotonase| OP:NHOMO 729 OP:NHOMOORG 593 OP:PATTERN ----------------1-----------1-1---111111111-1------1---1----1111---- -11-------------------------------------------------------------111---------------1111111111-1111--1111-1111-11---------1111-1111111111----11----122212222111111111221122221-1111111111---11--1--1---------------111111---1111---1111111-1------------------1------------------------------------------------------------------------------------------------1-1--11---111-1----1--2211-1--1-1--1111112211111111111111112-112112111-11111-11211111-2--1-1-11111-1--------11111111--11-11111111-111111-1111----111111-----11121111111111111111111111111111111111111111111211111111111111111121-211-11-1112--1-11221222222-121111111111111111111111-11221222122222111211221222212122121-1212111111112222121111111111-1111111111112-1111211122222111111111111111121121111212222222222221-22111111111121111112222221-22211111111111121111111111111111111111111112112222222221211111111111111----223322--------1--------------------------------------1- -----11-----------------------------------------------------------------------------------------------------31---------------------------------------------------------------231-11511-3----1---34----3 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 217 STR:RPRED 66.8 SQ:SECSTR ######################################################################################EEccEEcccccTTcEEHHHHHHHHHHHHHcTTEEEEEEEEEEccccHHHHHHHHHHHHHHHHTTccEEEEEEEEEETHHHHTTTTccEEEEcTTcEEEcccEEEEEEEcHHHHHHTTcccccccccGGGcccTTcccccccHHHHHHHHHHHHHHHHHHHHHHHTcHHHHHTTcTTcEEEHHHHHHTTcccEEccHHHHHHHHHHTcccEEEEcccE###################### DISOP:02AL 34-44, 66-87, 307-320| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEcccHHHHHHHHHHHHHHcccccccEEEEEEcccccHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHccccEEEEcccccccccHHEEccccHHHHHHHcccEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccEEcHHHHHHcccccccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHHHHHccc //