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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57360.1
DDBJ      :             response regulator receiver modulated diguanylate cyclase
Swiss-Prot:             

Homologs  Archaea  13/68 : Bacteria  818/915 : Eukaryota  14/199 : Viruses  0/175   --->[See Alignment]
c.23.1d.58.29
:327 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   54->323 3i5aA PDBj 6e-58 44.6 %
:RPS:PDB   24->325 3breB PDBj 5e-59 39.0 %
:RPS:SCOP  25->126 1a0oA  c.23.1.1 * 3e-20 26.0 %
:RPS:SCOP  164->325 1w25A3  d.58.29.2 * 2e-39 40.9 %
:HMM:SCOP  1->138 1k66A_ c.23.1.1 * 8.8e-34 39.1 %
:HMM:SCOP  164->324 1w25A3 d.58.29.2 * 5.2e-55 47.5 %
:RPS:PFM   25->122 PF00072 * Response_reg 3e-16 44.4 %
:RPS:PFM   162->320 PF00990 * GGDEF 2e-33 48.1 %
:HMM:PFM   161->321 PF00990 * GGDEF 2.8e-55 47.2 159/161  
:HMM:PFM   3->122 PF00072 * Response_reg 3.9e-29 36.7 109/112  
:BLT:SWISS 49->157 RPFG_XANC8 8e-16 38.7 %
:BLT:SWISS 143->321 PHY2_SYNY3 9e-44 48.0 %
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57360.1 GT:GENE ABA57360.1 GT:PRODUCT response regulator receiver modulated diguanylate cyclase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 927948..928931 GB:FROM 927948 GB:TO 928931 GB:DIRECTION + GB:PRODUCT response regulator receiver modulated diguanylate cyclase GB:PROTEIN_ID ABA57360.1 GB:DB_XREF GI:76882679 InterPro:IPR000160 InterPro:IPR001789 LENGTH 327 SQ:AASEQ MPILVVDDDEDLAHLLALRLQLVGGYEVCLAHSASAAFERLGIQGTEAAANIDLILMDVELPGINGIEACRRLKSHPLGQDIPVIMITGHDDQGSLEAAFEAGAVDYVTKPFDNASLMARVRSALRLKKEIGVRKQREQELLDLTYRLEAANEQLRQLTSLDDLTGIANRRQFEVTIHQEFQRAMRNKTVLSLIMIDIDNFKVYNDIYGHQTGDSCLRRVAAALDSVLKRPNDLLARYGGEEFAVILPETGSKGASNIAESLRQAVEILKIPHSYASQNNLRVTVSLGVATLIPQRGDEPTKLISIADQALYQSKHAGRNQVSVAVI GT:EXON 1|1-327:0| BL:SWS:NREP 2 BL:SWS:REP 49->157|RPFG_XANC8|8e-16|38.7|106/378| BL:SWS:REP 143->321|PHY2_SYNY3|9e-44|48.0|177/1276| COIL:NAA 9 COIL:NSEG 1 COIL:REGION 147->155| SEG 4->23|lvvdddedlahllalrlqlv| BL:PDB:NREP 1 BL:PDB:REP 54->323|3i5aA|6e-58|44.6|269/319| RP:PDB:NREP 1 RP:PDB:REP 24->325|3breB|5e-59|39.0|295/328| RP:PFM:NREP 2 RP:PFM:REP 25->122|PF00072|3e-16|44.4|90/111|Response_reg| RP:PFM:REP 162->320|PF00990|2e-33|48.1|156/160|GGDEF| HM:PFM:NREP 2 HM:PFM:REP 161->321|PF00990|2.8e-55|47.2|159/161|GGDEF| HM:PFM:REP 3->122|PF00072|3.9e-29|36.7|109/112|Response_reg| GO:PFM:NREP 3 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| RP:SCP:NREP 2 RP:SCP:REP 25->126|1a0oA|3e-20|26.0|96/128|c.23.1.1| RP:SCP:REP 164->325|1w25A3|2e-39|40.9|159/162|d.58.29.2| HM:SCP:REP 1->138|1k66A_|8.8e-34|39.1|138/149|c.23.1.1|1/1|CheY-like| HM:SCP:REP 164->324|1w25A3|5.2e-55|47.5|158/0|d.58.29.2|1/1|Nucleotide cyclase| OP:NHOMO 12729 OP:NHOMOORG 845 OP:PATTERN -----------------------------1--------1111-11-14-6423--------------- KNC7G21133231326533-3L4424333332G99A9MC9GFDVr54331--957133--DCA1G6NEDA62222343-1H5A8DMA777CB-7-----124234B1A68--------------1322443234C3RRRRQ524R5*ineVV6BCMM322855MXF9hfnD131211121211Q8C54CA2CFAGGHGGDIIBJHIIFG78777AGJL9CEO8NM777776QW5555555455555556556642432221-11552234244345-2-222333312222222222222122122222222221122211147QJAYFFFGHGHEFEBRDE7898KCH11CHJCDYWTLB76EB775882-2MCD9BB6-22129CgagD9MeXPae78CB7BCABCM-cbWXXHYXFZ82QXXYfdYhhkNLbMAGE7C5HGEEAC855555555EHH54qCT11111111111111111111111-11111-AFGD4CDB74RPQQSPKDDDCLLgnFFFF7ESacLYSY14RRNmPdRTe9GwFBaYaXNbfnP-------79ISv*9ciROLbaB*dQPW1eRalRYSbYDDDELOAFJ68822222121-1211111XLPRH54nfJinj*NuZnyknokqujpppcpikib**---ChJl------EJMF7R9HHHHHGHHIF-FHGIHCDGHGGGGGHHGGJLQMFJ334B8ADBBCBBBACBCDAG9C997BE3-H67777766777--2Y11111GIHHMF*Iy1-11111----1--2GFGFG8G343RdcacbhhjmmlilhZfek-----2---dUYYaddccbijjzzVUTUSURLMP5545--*2EE99EE11111111719-------------------------AA5998C8981D2 ----11--------2--------------------------------------------------------------------------------1--------------------------------------------------------------2----5---------92-34-------2--8--1--9---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 304 STR:RPRED 93.0 SQ:SECSTR #######################TTEEEEEEccHHHHHHHHHHcHHHHHHcccEEEEEcccTTccHHHHHHHHHHcTTTTTccEEEEEccccTTHHHHHHHHTccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccTTTccccHHHHHHHHHHHHHHHHHHTccEEEEEEEETTHHHHHHHHHHHHHHHHHHHHHHHHHHccccTTcEEEEccccEEEEEEETccHHHHHHHHHHHHHHHHTTccEEcccccTTEEccEEEEEEEEcccccccHHHHHHHHHHHHHHHHTTTcccEEEcEE DISOP:02AL 327-328| PSIPRED cEEEEEcccHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHccccccEEEEEcccccccHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHcHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEEcccEEEEEEccccHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHccccEEEEEEc //