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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57414.1
DDBJ      :             histidyl-tRNA synthetase
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  903/915 : Eukaryota  129/199 : Viruses  0/175   --->[See Alignment]
c.23.6c.51.1d.104.1
:423 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->421 1kmmC PDBj e-125 60.3 %
:RPS:PDB   4->421 1adjA PDBj 5e-56 40.1 %
:RPS:SCOP  4->319 1adjA2  d.104.1.1 * 3e-58 42.1 %
:RPS:SCOP  296->395 1e1cB2  c.23.6.1 * 2e-21 13.3 %
:HMM:SCOP  3->323 1kmmA2 d.104.1.1 * 6.6e-107 43.0 %
:HMM:SCOP  323->421 1kmmA1 c.51.1.1 * 2.2e-21 43.9 %
:RPS:PFM   24->150 PF00587 * tRNA-synt_2b 2e-15 43.5 %
:RPS:PFM   340->418 PF03129 * HGTP_anticodon 3e-10 42.3 %
:HMM:PFM   21->173 PF00587 * tRNA-synt_2b 2.3e-30 25.8 151/173  
:HMM:PFM   331->419 PF03129 * HGTP_anticodon 1.4e-12 31.0 87/94  
:HMM:PFM   286->318 PF00152 * tRNA-synt_2 0.00017 45.5 33/323  
:BLT:SWISS 2->421 SYH_SALTY e-145 60.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57414.1 GT:GENE ABA57414.1 GT:PRODUCT histidyl-tRNA synthetase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 983349..984620 GB:FROM 983349 GB:TO 984620 GB:DIRECTION + GB:PRODUCT histidyl-tRNA synthetase GB:PROTEIN_ID ABA57414.1 GB:DB_XREF GI:76882733 InterPro:IPR002314 InterPro:IPR004154 InterPro:IPR004516 InterPro:IPR006195 LENGTH 423 SQ:AASEQ MKKIQAIRGMNDLLPNQTPHWQRVEEVLSRVLASYGYQEIRLPLLEPTELFRRSIGEVTDIVEKEMYTFIDRNGDSLTLRPEGTAGCVRSILQHGLLTQGPLRLWYYGPMFRHERPQKGRYRQFYQIGVEVLGTKGPDVDAELILMTARFWRRLGLQDLRLQLNSLGSPAARIAYRERLVDFFTAHEDVLDEDSRRRLHSNPLRILDSKNPALQEIIEQAPQLLDYLDDDSRTHFEALRHTLDSADIAYKINPRLVRGLDYYTRTVFEWVSDQLGSQGTVCAGGRYDGLVEQLGGQSIPAVGFALGLDRLVALLGEQGRLKAPIPADLYLVAVGPQAERESLLFAERLREAIPAARLQVNYGGGSFKSQLKRADRSGARWALILGEDEIVQGTVSVKDLRQGQPQELVSQDKLSDYIKQQLQS GT:EXON 1|1-423:0| BL:SWS:NREP 1 BL:SWS:REP 2->421|SYH_SALTY|e-145|60.8|418/424| SEG 152->167|rrlglqdlrlqlnslg| BL:PDB:NREP 1 BL:PDB:REP 4->421|1kmmC|e-125|60.3|383/387| RP:PDB:NREP 1 RP:PDB:REP 4->421|1adjA|5e-56|40.1|414/420| RP:PFM:NREP 2 RP:PFM:REP 24->150|PF00587|2e-15|43.5|124/170|tRNA-synt_2b| RP:PFM:REP 340->418|PF03129|3e-10|42.3|78/91|HGTP_anticodon| HM:PFM:NREP 3 HM:PFM:REP 21->173|PF00587|2.3e-30|25.8|151/173|tRNA-synt_2b| HM:PFM:REP 331->419|PF03129|1.4e-12|31.0|87/94|HGTP_anticodon| HM:PFM:REP 286->318|PF00152|0.00017|45.5|33/323|tRNA-synt_2| GO:PFM:NREP 9 GO:PFM GO:0000166|"GO:nucleotide binding"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00587|IPR002314| GO:PFM GO:0005524|"GO:ATP binding"|PF00587|IPR002314| GO:PFM GO:0005737|"GO:cytoplasm"|PF00587|IPR002314| GO:PFM GO:0006412|"GO:translation"|PF00587|IPR002314| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF03129|IPR004154| GO:PFM GO:0005524|"GO:ATP binding"|PF03129|IPR004154| GO:PFM GO:0006412|"GO:translation"|PF03129|IPR004154| RP:SCP:NREP 2 RP:SCP:REP 4->319|1adjA2|3e-58|42.1|316/324|d.104.1.1| RP:SCP:REP 296->395|1e1cB2|2e-21|13.3|98/163|c.23.6.1| HM:SCP:REP 3->323|1kmmA2|6.6e-107|43.0|321/322|d.104.1.1|1/1|Class II aaRS and biotin synthetases| HM:SCP:REP 323->421|1kmmA1|2.2e-21|43.9|98/99|c.51.1.1|1/1|Class II aaRS ABD-related| OP:NHOMO 1348 OP:NHOMOORG 1100 OP:PATTERN 11111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111-11111111111111111111111-1111111-111111111111111111111111111112211211111111111--1111111111111111111111111111111111111222222222212111122222111111112122221111111111111211111112233333333133333331221233322221111111113311111111111111111111111111111111122111111111221111111122111111111111111111111111111112111113122111111111221222111312112222122221222222221111111111111111111111111111111111111112-1111111111111111111111111111111111111111111111111111-1111111111111111111111111111111-1111-111111111111111111111111111111111111111122211111111111111111111111111111111111111111111211222222212111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111211111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111 1111221-311-1111-11111-----11-111-----------11--11111111121111111---1-1-111---111-111----1----1--------2-2-2222-----31111-1112212CR2-236111-21212-212-22-21-1-1123--11-----12111-22P2222212422222233222 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 422 STR:RPRED 99.8 SQ:SECSTR TGGccccTTcccccHHHHHHHHHHHHHHHHHHHHTTcEEcccccEEEHHHHHHHHcTTcHHHHHcccEEEcTTccEEEEccccHHHHHHHHHHTTGGGcccEEEEEEEEEEcccccccccccEEEEEEEEEEccccHHHHHHHHHHHHHHHHHTTccccEEEEEEcccHHHHHHHHHHHHHHHGGGGGGccHHHHHHTTccGGGGTTcccHHHHHHHHTcccGGGGccHHHHHHHHHHHHHHHHTTccEEEcccccccccccccEEEEEEccccccccEEEEEEEcTTHHHHTTcccccEEEEEEEHHHHHHHHHTTccccccccccEEEEEccHHHHHHHHHHHHHHTTTccETccEEccccccHHHHHHHHHHTTccEEEEEcHHHHHHTEEEEEETTTccGEEEEETTHHHHHHHHHHc# DISOP:02AL 1-3| PSIPRED cccccccccccccccHHHHHHHHHHHHHHHHHHHcccEEEEccccccHHHHHHcccccccccccccEEEEcccccEEEEcccccHHHHHHHHHHHHcccccEEEEEEEEEEEccccccccccEEEEEEEEEEccccHHHHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccHHHccccccccEEEEEEEccccccEEEEEcccHHHHHHHccccccEEEEEEccHHHHHHHHHHHccccccccccEEEEEEcHHHHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHccccEEEEEcHHHHHccEEEEEEcccccEEEEEcHHHHHHHHHHHHcc //