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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57423.1
DDBJ      :             tyrosyl-tRNA synthetase
Swiss-Prot:SYY_NITOC    RecName: Full=Tyrosyl-tRNA synthetase;         EC=6.1.1.1;AltName: Full=Tyrosine--tRNA ligase;         Short=TyrRS;

Homologs  Archaea  46/68 : Bacteria  906/915 : Eukaryota  167/199 : Viruses  0/175   --->[See Alignment]
c.26.1d.66.1
:407 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->402 1h3eA PDBj 2e-89 46.8 %
:RPS:PDB   2->315 2cyaA PDBj 2e-54 19.2 %
:RPS:SCOP  3->341 1h3eA1  c.26.1.1 * e-104 46.8 %
:RPS:SCOP  323->396 1h3eA2  d.66.1.4 * 3e-06 33.8 %
:HMM:SCOP  3->316 1jilA_ c.26.1.1 * 1.4e-97 44.7 %
:HMM:SCOP  319->400 1h3fA2 d.66.1.4 * 7.9e-17 38.3 %
:RPS:PFM   34->311 PF00579 * tRNA-synt_1b 2e-37 38.7 %
:HMM:PFM   32->316 PF00579 * tRNA-synt_1b 4e-82 37.9 280/292  
:HMM:PFM   349->380 PF01479 * S4 2.6e-06 31.2 32/48  
:HMM:PFM   277->364 PF05697 * Trigger_N 0.00065 18.2 88/145  
:BLT:SWISS 1->407 SYY_NITOC 0.0 100.0 %
:PROS 42->52|PS00178|AA_TRNA_LIGASE_I
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57423.1 GT:GENE ABA57423.1 GT:PRODUCT tyrosyl-tRNA synthetase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 997758..998981 GB:FROM 997758 GB:TO 998981 GB:DIRECTION + GB:PRODUCT tyrosyl-tRNA synthetase GB:PROTEIN_ID ABA57423.1 GB:DB_XREF GI:76882742 InterPro:IPR001412 InterPro:IPR002305 InterPro:IPR002307 InterPro:IPR002942 LENGTH 407 SQ:AASEQ MVSPQQILDEIRRGTEEVLLEEELKLRLEQGRILRVKAGFDPTAPELHLGHTVLLNKLRQFQEFGHEVLFLIGDFTGMIGDPSGKNVTRQPLTRDKILENARTYEEQIFRVLDPEKTLVVFNSSWMSGMTAADLVRLSSHYTVARMLERDDFYKRYQGKRPIAIHEFLYPLLQGYDSVALKADVELGGTDQKFNLLVGRDLQKAYGQEQQIIITMPILEGLDGVQKMSKSLGNYIGISEPPREIFGKLMSISDDLMWRYLELLSSRPMSEISRWKKEVEQGANPRDIKVKLAKEIVARFHDDSMAEQVHEAFVAQFRRGAMPEDIPEILIVAGREGIAIARLLKESALTASTSESLRLIKQGAVKIDGQRLGNQSLQILPGITHVVQVGKRRFARVSIRLSEDQCRK GT:EXON 1|1-407:0| SW:ID SYY_NITOC SW:DE RecName: Full=Tyrosyl-tRNA synthetase; EC=6.1.1.1;AltName: Full=Tyrosine--tRNA ligase; Short=TyrRS; SW:GN Name=tyrS; OrderedLocusNames=Noc_0911; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Protein biosynthesis; RNA-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->407|SYY_NITOC|0.0|100.0|407/407| GO:SWS:NREP 7 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| PROS 42->52|PS00178|AA_TRNA_LIGASE_I|PDOC00161| SEG 16->29|eevlleeelklrle| BL:PDB:NREP 1 BL:PDB:REP 3->402|1h3eA|2e-89|46.8|393/427| RP:PDB:NREP 1 RP:PDB:REP 2->315|2cyaA|2e-54|19.2|302/328| RP:PFM:NREP 1 RP:PFM:REP 34->311|PF00579|2e-37|38.7|266/279|tRNA-synt_1b| HM:PFM:NREP 3 HM:PFM:REP 32->316|PF00579|4e-82|37.9|280/292|tRNA-synt_1b| HM:PFM:REP 349->380|PF01479|2.6e-06|31.2|32/48|S4| HM:PFM:REP 277->364|PF05697|0.00065|18.2|88/145|Trigger_N| GO:PFM:NREP 6 GO:PFM GO:0000166|"GO:nucleotide binding"|PF00579|IPR002305| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00579|IPR002305| GO:PFM GO:0005524|"GO:ATP binding"|PF00579|IPR002305| GO:PFM GO:0005737|"GO:cytoplasm"|PF00579|IPR002305| GO:PFM GO:0006412|"GO:translation"|PF00579|IPR002305| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00579|IPR002305| RP:SCP:NREP 2 RP:SCP:REP 3->341|1h3eA1|e-104|46.8|331/346|c.26.1.1| RP:SCP:REP 323->396|1h3eA2|3e-06|33.8|74/81|d.66.1.4| HM:SCP:REP 3->316|1jilA_|1.4e-97|44.7|311/323|c.26.1.1|1/1|Nucleotidylyl transferase| HM:SCP:REP 319->400|1h3fA2|7.9e-17|38.3|81/0|d.66.1.4|1/1|Alpha-L RNA-binding motif| OP:NHOMO 1237 OP:NHOMOORG 1119 OP:PATTERN ----1-111111111---1111111111111-1111111111111111111111----------1--- 2111111111111111111-11111111111111111111111111211111111111112111111111111111111111111111111111111111121112111111111111111111111211211111111111111111111111111111111111111111111111111111112211111122222222122222211221222211121111111111111111111111111111111212111111111111111111111111111111111111111111111111111111111111221111111122222222222211221111211111111122112111211111111111111111111111111111111111111111111-111111111121111111121111111211111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111222111111111111111111211111111111111111111111111111111111111111121111111111111111111111111111111221112211111112111111111111111111111-111111111111111111111111-111-11111111111111111111111222111111111111111111111111111111111111111111111111111111111111111111-11111111111111111222211111111111111111111111111122222221221111111-11111111111111111111111111111111-11111111111111111111112221222111 ----111-1------1111111111111111111--11-21111--11111111111111111111111111111-111111111111-11-1111111-1--111-1-1211111-11-11111111-151-11111111111-111--1114111121211111-111611211111A1111111121111111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 400 STR:RPRED 98.3 SQ:SECSTR HcHHHHHHHHHHTTccEEETHHHHHHHHHHccccEEEEEEccccccccTHHHHHHHHHHHHHHTTcEEEEEEcHHHHHHTTGGGGcHHHHHHHHHHHHHHHHHTTccGGGcEEEEHHHHHTcHHHHHHHHHHHHHHHHHTccHHHHHcHHHHHTTcccGGGccTHHHHHHHHHHHHHHHTTccEEEEEGGGHHHHHHHHHHHTTTTccccEEEEEccccccccccccccccGGGcccTTcTTccTTcHHHHHHHTTTTcccEEcccEEccHHHHHHHHHTTccHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHTcccTTTTTTcccccHHHHHHHHTTcEEETTEEcccTTccccTTEEEEEcccTTccHHH##EEcc##### DISOP:02AL 1-4, 219-234, 321-323, 404-407| PSIPRED cccHHHHHHHHHccHHHcccHHHHHHHHHcccccEEEEEccccccccHHHHHHHHHHHHHHHHccccEEEEEEccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEccccccccHHHHHHHHHcccHHHHHHHcHHHHHHHccccccHHHHHHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHHHcccccEEEEccEEEccccccccccccccEEcccccHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccccccccEEEcccccccHHHHHHHcccccccHHHHHHHHcccEEEccEEEcccccEEEcccEEEEEEcccEEEEEEEEEccHHHcc //