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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57436.1
DDBJ      :             RecA protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  894/915 : Eukaryota  14/199 : Viruses  2/175   --->[See Alignment]
c.37.1d.48.1
:342 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   1->341 3cmxA PDBj e-115 65.6 %
:RPS:PDB   1->312 3cmxA PDBj 4e-52 63.7 %
:RPS:SCOP  2->268 1g18A1  c.37.1.11 * 2e-36 57.4 %
:RPS:SCOP  269->327 1g18A2  d.48.1.1 * 2e-15 54.2 %
:HMM:SCOP  4->268 1g19A1 c.37.1.11 * 2.9e-78 37.1 %
:HMM:SCOP  269->328 1ubeA2 d.48.1.1 * 2.9e-21 58.3 %
:RPS:PFM   21->293 PF00154 * RecA e-100 69.5 %
:HMM:PFM   7->327 PF00154 * RecA 2.8e-176 73.8 321/323  
:BLT:SWISS 1->338 RECA_ALHEH e-138 77.5 %
:PROS 214->222|PS00321|RECA_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57436.1 GT:GENE ABA57436.1 GT:PRODUCT RecA protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1019737..1020765 GB:FROM 1019737 GB:TO 1020765 GB:DIRECTION + GB:PRODUCT RecA protein GB:PROTEIN_ID ABA57436.1 GB:DB_XREF GI:76882755 InterPro:IPR001553 InterPro:IPR003593 LENGTH 342 SQ:AASEQ MDENRKKALGAALSQIEKQFGKGAVMRLGDASIVREVEVISTGSLGLDIALGVGGLPRGRVVEIFGPEASGKTTLALQVAAEAQALGGTAAFVDAEHALDPQYAERLGVSVEDLLVSQPDTGEQALEIADMLVRSGAVDVVVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGALKKGDEIVGNETRVKVVKNKMAPPFKQVSFDILYGSGVSREGEIIDLGVREGFIEKAGAWYSYNGERIGQGRDNVRQFLKEHRELAQGIEAHIREKLLPGKAALEEVQEAVT GT:EXON 1|1-342:0| BL:SWS:NREP 1 BL:SWS:REP 1->338|RECA_ALHEH|e-138|77.5|338/347| PROS 214->222|PS00321|RECA_1|PDOC00131| SEG 51->62|lgvgglprgrvv| SEG 75->91|lalqvaaeaqalggtaa| SEG 137->148|avdvvvidsvaa| BL:PDB:NREP 1 BL:PDB:REP 1->341|3cmxA|e-115|65.6|340/1603| RP:PDB:NREP 1 RP:PDB:REP 1->312|3cmxA|4e-52|63.7|311/1603| RP:PFM:NREP 1 RP:PFM:REP 21->293|PF00154|e-100|69.5|272/274|RecA| HM:PFM:NREP 1 HM:PFM:REP 7->327|PF00154|2.8e-176|73.8|321/323|RecA| GO:PFM:NREP 3 GO:PFM GO:0003697|"GO:single-stranded DNA binding"|PF00154|IPR013765| GO:PFM GO:0005524|"GO:ATP binding"|PF00154|IPR013765| GO:PFM GO:0006281|"GO:DNA repair"|PF00154|IPR013765| RP:SCP:NREP 2 RP:SCP:REP 2->268|1g18A1|2e-36|57.4|249/250|c.37.1.11| RP:SCP:REP 269->327|1g18A2|2e-15|54.2|59/60|d.48.1.1| HM:SCP:REP 4->268|1g19A1|2.9e-78|37.1|264/0|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 269->328|1ubeA2|2.9e-21|58.3|60/0|d.48.1.1|1/1|RecA protein, C-terminal domain| OP:NHOMO 968 OP:NHOMOORG 910 OP:PATTERN -------------------------------------------------------------------- 1121111111111111111-11111111111111111111111311111111111111111111111111111111111111111111111111111--111111111111111111111111111111111111111111111117111111111111111111111111111111111111311111111111-122112112211211111121121111111111111111111111111111111111111122111111111221111111111111111111111111111111111111111111111111111111111111111111111111111111111211111111111121111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111121111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111222222111111111111111111111111111111111111111111111111111111111111111111------11111111111111111-11-11111111111111111111111111111111111211111111111111122212222111--11111111111111111111111111111111111111111111111111121111111111111111111111111111111111111111111111--11111111111111-1111--211-11111111111111111111111111111111 ----1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-31-1---336-4----211- -------1--------------------------------------------------------------------------------------1-------------------------------------------------------------------------------- DISOP:02AL 1-4, 31-32, 154-167, 333-342| PSIPRED ccHHHHHHHHHHHHHHHHcccccHHHHcccHHHHHcccccccccHHHHHHHccccccccEEEEEEccccccHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHccHHHEEEEccccHHHHHHHHHHHHHccccEEEEEEccHHHEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccEEEEcccccccccccccccEEEEEEEEEEEEEEcccHHHHHHcccccEEEEEEEccccccccEEEEEEEEcccccccccHHHHHHHcccEEEcccEEEEccEEEEccHHHHHHHHHccHHHHHHHHHHHHHHHccccccHHHHHcccc //