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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57445.1
DDBJ      :             ABC transporter, inner membrane subunit
Swiss-Prot:             

Homologs  Archaea  53/68 : Bacteria  775/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:325 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   218->256 3dhwA PDBj 3e-06 23.1 %
:RPS:SCOP  93->323 2r6gG1  f.58.1.1 * 5e-09 9.6 %
:RPS:PFM   209->323 PF00528 * BPD_transp_1 2e-04 36.9 %
:HMM:PFM   130->323 PF00528 * BPD_transp_1 1.3e-34 30.4 181/185  
:BLT:SWISS 1->323 Y209_BRUME 1e-31 32.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57445.1 GT:GENE ABA57445.1 GT:PRODUCT ABC transporter, inner membrane subunit GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1030732..1031709 GB:FROM 1030732 GB:TO 1031709 GB:DIRECTION + GB:PRODUCT ABC transporter, inner membrane subunit GB:PROTEIN_ID ABA57445.1 GB:DB_XREF GI:76882764 InterPro:IPR000515 LENGTH 325 SQ:AASEQ MLAYIVRRILYAIPILVGVNILTFALFFGINSPDDMARMHLGTKRVTQEAIDAWKRERGYDKPLFWNSDAKGEDKFTETIFFTKSISLFLFQFGHADDGRDIGHDLRTRMWPSLAIAAPIFIGGLLVNTTFALLMVFFRGTYLDLGGVVLCVALMSISTLFYVIMGQYLVGKLMHLVPVSGYVGGLDAFKFIILPIIIGIISGIGAGARWYRTLFLEEVGKDYVRTARAKGLSEFKVLFKHILKNALIPILTGAVVILPTLFLGSLILESFFGIPGLGSYTIDAIQAQDFAIVRAMVFLGSVLYILGLILTDISYTLVDPRVRLN GT:EXON 1|1-325:0| BL:SWS:NREP 1 BL:SWS:REP 1->323|Y209_BRUME|1e-31|32.2|301/315| TM:NTM 6 TM:REGION 9->31| TM:REGION 113->135| TM:REGION 152->174| TM:REGION 186->208| TM:REGION 257->279| TM:REGION 289->311| SEG 192->207|iilpiiigiisgigag| RP:PDB:NREP 1 RP:PDB:REP 218->256|3dhwA|3e-06|23.1|39/203| RP:PFM:NREP 1 RP:PFM:REP 209->323|PF00528|2e-04|36.9|111/195|BPD_transp_1| HM:PFM:NREP 1 HM:PFM:REP 130->323|PF00528|1.3e-34|30.4|181/185|BPD_transp_1| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515| GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515| GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515| RP:SCP:NREP 1 RP:SCP:REP 93->323|2r6gG1|5e-09|9.6|219/284|f.58.1.1| OP:NHOMO 3346 OP:NHOMOORG 834 OP:PATTERN 33413-32333343-4351221113336435212---1-----113-42-C95-54432131214-1- -113C343444-3112222-2211292222224333145613-44A9423336A632411442395667A42222422322-411111--------2--------11--122222222222222211111111121465852216A3321333221111-111322142221-1-11-11-1194433881423666664564546445976663655314B521222222E6144434444444444333122222332-12111--33111112234333333311112211111112222222222222221111211111C26244434541422222111153143B-11198631-282-3462164311----1121132GGO115854919AAA9AA8AAJ-44B4393CPM1-hQQVJJCVTMMOK3-114CC96AA6CD1111111122222219-------------------------------11--BFBCC66777644555559955552566E5387113342353353B5BQ241142242-------111221346132352233331111111211----1211-11--------222222122-3-12114321211111411111-111111-111111--13321------76IC2987777777777-77777777777776767759A9B93355555555555555555876666674-555555545555--1111111111111747444-12322124122222221212333332335572644429A91----1---245565555556588----------------12111111222122126-111-11-1122111222122122---338449E988212 -----------------------------------------------------------------------------------------------------------------1--------------------------------------------2----2---------1-----------1--1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 39 STR:RPRED 12.0 SQ:SECSTR #########################################################################################################################################################################################################################HccTTTTTHHHHHTccTHHHHHHTTHHHHHHHHHHHHHH##################################################################### DISOP:02AL 325-326| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHccccccHHHHHHHHHHcccccHHHHHHHHHcccccccEEEEEEEHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc //