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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57493.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  122/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.2.1
:218 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   49->176 1dkkA PDBj 1e-13 17.8 %
:RPS:SCOP  51->180 1qsaA2  d.2.1.6 * 5e-09 15.4 %
:HMM:SCOP  4->210 153lA_ d.2.1.5 * 5.6e-21 21.3 %
:HMM:PFM   54->170 PF01464 * SLT 0.00026 21.8 101/121  
:HMM:PFM   15->32 PF08139 * LPAM_1 0.00046 58.8 17/26  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57493.1 GT:GENE ABA57493.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1086872..1087528 GB:FROM 1086872 GB:TO 1087528 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID ABA57493.1 GB:DB_XREF GI:76882812 LENGTH 218 SQ:AASEQ MEYETSRRIFYPPIKYCFIILFLLSLLTGCASTPPASTANLCVIFEKQPEWYDYAKESEKKWGTPTPILMAFIHRESSFRGDARPPRRWFLGFIPLPRSSSAYGYGQIQDPAWEDYLGANGGWFKSRADMEDVLDFIGWYNHISARRLGISKRNPEHLYLAYHEGHRGYQRGAWRRKPHLRRVAKRVARQARMYGSQLKSCEDRFKCRKFYQFWPFCR GT:EXON 1|1-218:0| TM:NTM 1 TM:REGION 10->32| SEG 181->192|rrvakrvarqar| RP:PDB:NREP 1 RP:PDB:REP 49->176|1dkkA|1e-13|17.8|118/129| HM:PFM:NREP 2 HM:PFM:REP 54->170|PF01464|0.00026|21.8|101/121|SLT| HM:PFM:REP 15->32|PF08139|0.00046|58.8|17/26|LPAM_1| RP:SCP:NREP 1 RP:SCP:REP 51->180|1qsaA2|5e-09|15.4|117/168|d.2.1.6| HM:SCP:REP 4->210|153lA_|5.6e-21|21.3|183/0|d.2.1.5|1/1|Lysozyme-like| OP:NHOMO 131 OP:NHOMOORG 122 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111-------------11111111111---------11--111111111111--1--1111111111---------------------------------------------1------1111---------------------------------------------------------------------1-------------------------------------------------------111111111111111111111111111111--1111---------------------------------------------------------------------------------------------111111111111-----------------------------11-111-11---------22222222211111-----11111--------------111-------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 137 STR:RPRED 62.8 SQ:SECSTR ###########################################cccHHHHHHHHHTTcTTcTTccHHHHHHHHHHHHTTcTTcEEEcTTcEEEEEcTTccEEETTTTEETTTTcccccccTTcccTTcccGGGGGccccHHHHHHHHHHHTcccGGGGcHHHHHHTTTccGGGGGTGccc###################################### DISOP:02AL 1-4| PSIPRED cccccccEEEccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHccccccccHHHEEEEEEccccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccc //