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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57597.1
DDBJ      :             SelT/selW/selH selenoprotein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  97/915 : Eukaryota  67/199 : Viruses  0/175   --->[See Alignment]
c.47.1
:93 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->86 2obkF PDBj 6e-25 54.2 %
:RPS:PDB   4->83 3dexH PDBj 1e-30 60.8 %
:HMM:SCOP  1->86 2fa8A1 c.47.1.23 * 8e-28 50.0 %
:RPS:PFM   4->77 PF10262 * Rdx 2e-23 55.4 %
:HMM:PFM   4->78 PF10262 * Rdx 3.1e-35 58.7 75/76  
:BLT:SWISS 5->76 CQ037_MOUSE 4e-05 36.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57597.1 GT:GENE ABA57597.1 GT:PRODUCT SelT/selW/selH selenoprotein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(1198701..1198982) GB:FROM 1198701 GB:TO 1198982 GB:DIRECTION - GB:PRODUCT SelT/selW/selH selenoprotein GB:PROTEIN_ID ABA57597.1 GB:DB_XREF GI:76882916 InterPro:IPR007843 InterPro:IPR011893 LENGTH 93 SQ:AASEQ MSNKIEIQYCTKCRWLLRAAWIAQELLTTFEQEISELTLRPGTGGVFNIFANGKLVWSRKEAGRFPEITELKQLVRNQIAPTKDLGHADKKHK GT:EXON 1|1-93:0| BL:SWS:NREP 1 BL:SWS:REP 5->76|CQ037_MOUSE|4e-05|36.8|68/115| BL:PDB:NREP 1 BL:PDB:REP 4->86|2obkF|6e-25|54.2|83/86| RP:PDB:NREP 1 RP:PDB:REP 4->83|3dexH|1e-30|60.8|79/83| RP:PFM:NREP 1 RP:PFM:REP 4->77|PF10262|2e-23|55.4|74/76|Rdx| HM:PFM:NREP 1 HM:PFM:REP 4->78|PF10262|3.1e-35|58.7|75/76|Rdx| GO:PFM:NREP 2 GO:PFM GO:0008430|"GO:selenium binding"|PF10262|IPR019389| GO:PFM GO:0045454|"GO:cell redox homeostasis"|PF10262|IPR019389| HM:SCP:REP 1->86|2fa8A1|8e-28|50.0|86/0|c.47.1.23|1/1|Thioredoxin-like| OP:NHOMO 165 OP:NHOMOORG 164 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1-11-1-1-----------------------1-------------------------------------1-1-1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------11111111111-1111111111--111111111111-------------1------------1----------------------------------------1111------------------------------------------------111--------------------------------------------1-----------------------------111-11---------------------------1---------------1------------------------------111--------------------------------------------------------11111-------------------------1111111111111111111--------------1111111111------------------------------------------------------------------------- --------------1111--11111111111-11111111111111-11111111-111--111-111----11------1-----------1-111-11---111--2--------------------------------------------------------------------------------1--1111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 86 STR:RPRED 92.5 SQ:SECSTR #cEEEEEEEETTTTcHHHHHHHHHHHHHHcTTTEEEEEEEEEccccEEEEETTEEEEEHHHHcccccHHHHHHHHHHHccccccccc###### DISOP:02AL 86-93| PSIPRED cccEEEEEEcccccccHHHHHHHHHHHHHcccccccEEEEEccccEEEEEEccEEEEEEEcccccccHHHHHHHHHHHccccccccccccccc //