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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57676.1
DDBJ      :             Electron transport complex, RnfABCDGE type, C subunit
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  275/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.1.2c.142.1d.15.13d.58.1
:515 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   126->338 3i9v1 PDBj 2e-08 29.1 %
:BLT:PDB   369->423 1fdx- PDBj 1e-06 51.2 %
:RPS:PDB   18->110 1ci3M PDBj 6e-10 19.3 %
:RPS:PDB   369->435 2bs2B PDBj 7e-09 29.9 %
:RPS:SCOP  121->297 2fug12  c.142.1.1 * 3e-47 26.0 %
:RPS:SCOP  288->355 2fug13  d.15.13.1 * 6e-09 20.9 %
:RPS:SCOP  369->436 1jb0C  d.58.1.2 * 2e-11 27.3 %
:HMM:SCOP  87->297 2fug12 c.142.1.1 * 1.2e-66 38.4 %
:HMM:SCOP  320->439 2bs2B1 a.1.2.1 * 3.5e-22 28.7 %
:RPS:PFM   133->275 PF01512 * Complex1_51K 4e-15 40.8 %
:HMM:PFM   133->277 PF01512 * Complex1_51K 1.5e-56 54.9 144/151  
:HMM:PFM   291->337 PF10531 * SLBB 5.6e-13 45.7 46/59  
:HMM:PFM   369->382 PF00037 * Fer4 4.1e-07 85.7 14/24  
:HMM:PFM   407->420 PF00037 * Fer4 0.00023 57.1 14/24  
:BLT:SWISS 1->435 RNFC_VIBCH e-126 52.3 %
:PROS 369->380|PS00198|4FE4S_FER_1
:PROS 408->419|PS00198|4FE4S_FER_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57676.1 GT:GENE ABA57676.1 GT:PRODUCT Electron transport complex, RnfABCDGE type, C subunit GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(1281996..1283543) GB:FROM 1281996 GB:TO 1283543 GB:DIRECTION - GB:PRODUCT Electron transport complex, RnfABCDGE type, C subunit GB:PROTEIN_ID ABA57676.1 GB:DB_XREF GI:76882995 InterPro:IPR001450 InterPro:IPR010208 InterPro:IPR011538 LENGTH 515 SQ:AASEQ MKTRRLWSFSGGLKLPGHKNPSTPMPIVQAALPKRLVLPLQQHIGEAAEPMVSIGDQVLKGQVIATAQGYLSAPVHASSSGQVVALENRPIPHPSGLSAPCIVIETDGKDAWGERHPVENYRQIDPSHLRNLIRQAGIVGLGGAGFPTFIKLNPGPQPKVKTLILNGAECEPYITCDEALMRERAEEIIQGAAIMAHALNAYHCLIGIEDDKPEACTVLAAAAAEGIEVVPIPTRYPAGGEKQLIKVLTGQEVPSNGLPIDIGVVCHNVGTAAAVYRAIHRGEPLLSRIMTVAGKAVAHPGNLEVLLGTPIRHLLAQQGANIQSIDRLIMGGPMMGFTLHDDGAPVIKTTNCLLAGLHEDTRQPPAMPCIRCGACVEACPVGLLPQQLYWHARAKELDKTQDYHLFDCIECGCCAYVCPSHIPLVQYYRYAKSEIWTQEQEREKADLARQRHEFRQQRLAREQQQKAARQRARKAPVTPSASKAEKQAAIQAAVERSQAKRAAQKTAEDEPFSSP GT:EXON 1|1-515:0| BL:SWS:NREP 1 BL:SWS:REP 1->435|RNFC_VIBCH|e-126|52.3|434/774| PROS 369->380|PS00198|4FE4S_FER_1|PDOC00176| PROS 408->419|PS00198|4FE4S_FER_1|PDOC00176| SEG 220->224|aaaaa| SEG 455->475|rqqrlareqqqkaarqrarka| BL:PDB:NREP 2 BL:PDB:REP 126->338|3i9v1|2e-08|29.1|213/437| BL:PDB:REP 369->423|1fdx-|1e-06|51.2|43/54| RP:PDB:NREP 2 RP:PDB:REP 18->110|1ci3M|6e-10|19.3|88/249| RP:PDB:REP 369->435|2bs2B|7e-09|29.9|67/239| RP:PFM:NREP 1 RP:PFM:REP 133->275|PF01512|4e-15|40.8|142/162|Complex1_51K| HM:PFM:NREP 4 HM:PFM:REP 133->277|PF01512|1.5e-56|54.9|144/151|Complex1_51K| HM:PFM:REP 291->337|PF10531|5.6e-13|45.7|46/59|SLBB| HM:PFM:REP 369->382|PF00037|4.1e-07|85.7|14/24|Fer4| HM:PFM:REP 407->420|PF00037|0.00023|57.1|14/24|Fer4| GO:PFM:NREP 4 GO:PFM GO:0010181|"GO:FMN binding"|PF01512|IPR011538| GO:PFM GO:0016651|"GO:oxidoreductase activity, acting on NADH or NADPH"|PF01512|IPR011538| GO:PFM GO:0051287|"GO:NAD or NADH binding"|PF01512|IPR011538| GO:PFM GO:0051539|"GO:4 iron, 4 sulfur cluster binding"|PF01512|IPR011538| RP:SCP:NREP 3 RP:SCP:REP 121->297|2fug12|3e-47|26.0|177/243|c.142.1.1| RP:SCP:REP 288->355|2fug13|6e-09|20.9|67/84|d.15.13.1| RP:SCP:REP 369->436|1jb0C|2e-11|27.3|66/80|d.58.1.2| HM:SCP:REP 87->297|2fug12|1.2e-66|38.4|211/0|c.142.1.1|1/1|Nqo1 FMN-binding domain-like| HM:SCP:REP 320->439|2bs2B1|3.5e-22|28.7|115/0|a.1.2.1|1/1|alpha-helical ferredoxin| OP:NHOMO 408 OP:NHOMOORG 277 OP:PATTERN -------------------------------------------------11----------------- --1-------------1----1------------------------------------------------1---------1-2-----1111-111--------------------------------1-111-11----------------------------------------------------11-----------------------------------111111---------------------------------------------------------------------------------------------43-23554565232-255111-21111111--22-2--14--11---11------------------------------------------------------------------1--2222----------------1-----------111----------------------1---------------------------------------------------21-1--2----------222-22331122-311---------1-------11---------------------------113121111111211111111111211112--11131-1-11131111121221111132-2212121212213111113222111112222222222222222122122231-211111111111---1---------211-1111111111111111----------211111----1----2------------111111111111211--------------1111--------------211-------------------------1111111111-1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 441 STR:RPRED 85.6 SQ:SECSTR ##HHHHHHHTTccccccEEEEEETTTcccEEEEEEcccTTTcTTcccEEEEEEEEEEEccccccTTccccccccccccccEEEEEEEcccEEEcTTccEEEEEEcTTccEccHHHTccc######HHHHHHHHHTTTcccTTTTcccHHHHHTccccccccEEEEEcccccTTcccHHHHHHHcHHHHHHHHHHHHHHHTccEEEEEEcTTcHHHHHHHHHHHHHHEEEEEccccGGGGcHHHHHHHHTTccccccccTTTccGEEEEHHHHHTHHHHHHccHHHHHTccccccccccccEEEEEETTccHHHHHHTTccccccEEccTccccccccccHHHHHHHHHHHHHHHHHHTTcTTcHHHHHcccccHHHHTcHHHHHHHHHHHTcTTccccHHHHHHGGGcccccHHHHHcTTcccHHHHHHHHHHHHcccccEEccccccc################################################################## DISOP:02AL 1-3, 457-483, 496-515| PSIPRED cccccEEEcccccccccccccHHHccccccccccEEEEEEEccccccccEEEEEccEEEccEEEccccccccccccccccccEEEEEEEEEcccccccccEEEEEccccccccccccHHHHHHccHHHHHHHHHHcccEEcccccccHHHHccccccccccEEEEEcccccccccccHHHHHHcHHHHHHHHHHHHHHHcccEEEEEEEccHHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHcccccccccccccccEEEEcHHHHHHHHHHHHccccEEEEEEEEccHHHHcccEEEEEccccHHHHHHHHccccccccEEEEcccccccccccccEEEEccccHHHHHHHHHHccccHHHcccccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccccccc //