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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57704.1
DDBJ      :             DNA polymerase, beta-like region
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  32/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.218.1
:96 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->96 1j0lA PDBj 3e-18 48.9 %
:RPS:PDB   20->91 3c66B PDBj 2e-04 16.7 %
:RPS:SCOP  4->96 1wotA  d.218.1.5 * 4e-10 44.6 %
:HMM:SCOP  4->96 1knyA2 d.218.1.1 * 8.7e-18 34.4 %
:RPS:PFM   9->96 PF01909 * NTP_transf_2 8e-05 36.0 %
:HMM:PFM   15->94 PF01909 * NTP_transf_2 1.6e-14 32.5 80/93  
:BLT:SWISS 10->96 Y435_METJA 1e-10 37.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57704.1 GT:GENE ABA57704.1 GT:PRODUCT DNA polymerase, beta-like region GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(1310407..1310697) GB:FROM 1310407 GB:TO 1310697 GB:DIRECTION - GB:PRODUCT DNA polymerase, beta-like region GB:PROTEIN_ID ABA57704.1 GB:DB_XREF GI:76883023 InterPro:IPR001201 InterPro:IPR002934 LENGTH 96 SQ:AASEQ MLLDELRAKKETIAALGSQYGARHIRIFGSVARGEERPDSDVDFLVEFPRGYDLFAQRLPLTERLEALLQRRVEVIPEHELNRHLRDQILKEAVEL GT:EXON 1|1-96:0| BL:SWS:NREP 1 BL:SWS:REP 10->96|Y435_METJA|1e-10|37.2|86/93| BL:PDB:NREP 1 BL:PDB:REP 1->96|1j0lA|3e-18|48.9|94/98| RP:PDB:NREP 1 RP:PDB:REP 20->91|3c66B|2e-04|16.7|72/529| RP:PFM:NREP 1 RP:PFM:REP 9->96|PF01909|8e-05|36.0|86/104|NTP_transf_2| HM:PFM:NREP 1 HM:PFM:REP 15->94|PF01909|1.6e-14|32.5|80/93|NTP_transf_2| GO:PFM:NREP 1 GO:PFM GO:0016779|"GO:nucleotidyltransferase activity"|PF01909|IPR002934| RP:SCP:NREP 1 RP:SCP:REP 4->96|1wotA|4e-10|44.6|92/98|d.218.1.5| HM:SCP:REP 4->96|1knyA2|8.7e-18|34.4|93/0|d.218.1.1|1/1|Nucleotidyltransferase| OP:NHOMO 47 OP:NHOMOORG 37 OP:PATTERN -------------------------------------------3-121--1----------------- -------------------------------------------1----------------------------------------------------------------1---------------------------111-2------222122------------12-------------------11---------------------------------------------------------------------------------------------------------------------------------------1--------------------------------1--1-1-------1---1---11-----------------1---------------------------------------------------------------------------------------------------------------------------------------------------1------------------------1----------------------11---------------------------------------------------------------------1--1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 96 STR:RPRED 100.0 SQ:SECSTR ccHHHHHHHHHHHHHHHHHHTccEEEEEHHHHHTcccccccEEEEEEEcTTccHHHHTTHHHHHHHTcccEEEEEEETTccccEEEEEETTHcEEc PSIPRED ccHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEccccccccEEEEEEEccccccHHHHHHHHHHHHHHHccEEEEEcHHHHcHHHHHHHHHHHccc //