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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57712.1
DDBJ      :             Cytidine/deoxycytidylate deaminase, zinc-binding region
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  108/915 : Eukaryota  18/199 : Viruses  0/175   --->[See Alignment]
c.97.1
:153 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   4->104 1wkqB PDBj 6e-09 35.0 %
:RPS:PDB   3->101 2a8nA PDBj 3e-16 26.3 %
:RPS:SCOP  2->104 1tiyA  c.97.1.2 * 3e-22 33.3 %
:HMM:SCOP  1->151 2g84A1 c.97.1.2 * 2.2e-23 34.9 %
:RPS:PFM   4->96 PF00383 * dCMP_cyt_deam_1 5e-05 36.8 %
:HMM:PFM   3->97 PF00383 * dCMP_cyt_deam_1 9.9e-12 30.1 93/102  
:BLT:SWISS 1->117 FCYS_SCHPO 3e-13 32.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57712.1 GT:GENE ABA57712.1 GT:PRODUCT Cytidine/deoxycytidylate deaminase, zinc-binding region GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1325253..1325714 GB:FROM 1325253 GB:TO 1325714 GB:DIRECTION + GB:PRODUCT Cytidine/deoxycytidylate deaminase, zinc-binding region GB:PROTEIN_ID ABA57712.1 GB:DB_XREF GI:76883031 InterPro:IPR002125 LENGTH 153 SQ:AASEQ MQHLRRCVELATKALESGDEPFGSVLVAADGEVLFEDRNRVASGDRTRHPEFEIARWAATNMTPEARVAATVYTSGEHCPMCAAAHGWVGLGRIVYVSSSEQLATWLTELGVPAPPVRTLPIRKVVPNVPVEGPVPSLAEQVHELHRRFHGSS GT:EXON 1|1-153:0| BL:SWS:NREP 1 BL:SWS:REP 1->117|FCYS_SCHPO|3e-13|32.5|114/162| SEG 125->136|vvpnvpvegpvp| BL:PDB:NREP 1 BL:PDB:REP 4->104|1wkqB|6e-09|35.0|100/155| RP:PDB:NREP 1 RP:PDB:REP 3->101|2a8nA|3e-16|26.3|99/130| RP:PFM:NREP 1 RP:PFM:REP 4->96|PF00383|5e-05|36.8|87/100|dCMP_cyt_deam_1| HM:PFM:NREP 1 HM:PFM:REP 3->97|PF00383|9.9e-12|30.1|93/102|dCMP_cyt_deam_1| GO:PFM:NREP 2 GO:PFM GO:0008270|"GO:zinc ion binding"|PF00383|IPR002125| GO:PFM GO:0016787|"GO:hydrolase activity"|PF00383|IPR002125| RP:SCP:NREP 1 RP:SCP:REP 2->104|1tiyA|3e-22|33.3|102/157|c.97.1.2| HM:SCP:REP 1->151|2g84A1|2.2e-23|34.9|146/0|c.97.1.2|1/1|Cytidine deaminase-like| OP:NHOMO 146 OP:NHOMOORG 133 OP:PATTERN ------------------------1--11-1-------------------111--------------- 1---2--1111---211----1---1------11111121----112-----111----------1112-1-----------------1111--11------------1----------------------------------------------11----------111----------------------------------------------------2---------2---------------------------------------------------------------------------------------------------------------------------------------------------------1111--1----------------------1-1-1--1--1-12111--------------------------11---1--------------------------------------------1---------11------1-1111------111112---2-11---------------1---11--1----1---------1----------1--------------------------1-----------------------------------2-----------------------------------------------1-------------------------------------------------------------1---------------1111111-1--------21------1-----------------111111-1--------------------------------------------------------------------------- ---------------1-------1-11--------------------111111111-------------------------------1---------------1-----1-----------------------------------------------------1----------------------------1------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 148 STR:RPRED 96.7 SQ:SECSTR #HHHHHHHHHHHHHHHTTccccEEEEEETTEEEEEEEccHHHHTcTTccHHHHHHHHHHHHHTccccTTcEEEEEEcccHHHHHHHHHTTccEEEEEEccTcccEEHHTTcTcTTcccTTTcccTTcccccEEEccTTHHHHHHHHHHH#### PSIPRED cHHHHHHHHHHHHHHHcccccEEEEEEccccEEEEEEEcccccccccHHHHHHHHHHHHHHcccccccccEEEEEccccHHHHHHHHHccccEEEEEcccccHHHHHHHccccccccccccHHHHccccEEEEcHHHHHHHHHHHHHHHHccc //