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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57727.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  26/915 : Eukaryota  58/199 : Viruses  0/175   --->[See Alignment]
c.66.1f.38.1
:517 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   275->374 1inlD PDBj 3e-05 31.0 %
:RPS:PDB   239->430 3c6kD PDBj 5e-14 16.5 %
:RPS:SCOP  284->436 1inlA  c.66.1.17 * 2e-13 23.9 %
:HMM:SCOP  13->205 1pw4A_ f.38.1.1 * 0.00027 22.5 %
:HMM:SCOP  239->437 2o07A1 c.66.1.17 * 8.6e-29 29.2 %
:RPS:PFM   280->429 PF01564 * Spermine_synth 7e-09 33.8 %
:BLT:SWISS 243->410 SPEE_VIBVY 1e-16 38.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57727.1 GT:GENE ABA57727.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1342403..1343956 GB:FROM 1342403 GB:TO 1343956 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID ABA57727.1 GB:DB_XREF GI:76883046 LENGTH 517 SQ:AASEQ MNDLSLNFPGRAGLYFIVFLTGAAVMIIEILGTRMIAPFYGASLYVWSSLISVTMIALALGYFIGGRWADRAERTGLSLIIALAALLTLLIPWLTRPVLLATDPLGLRAGALVSALVLFSPSLTFLGMVGPFAVKLSTANLAGVGASAGSIYGISTLGSVVGTLLLGFYLFPIVGSREIFIVLGLVLFLLAIAVAFYERKRLRFTSALLPIDFLAAIGIGLLPQIAGANRTDSNKESFQVQFERESLYGWVRVIDQPARDLRLLTADASTIGAASITHGQNRLAYQNIVPLIPALAPPMKRALLIGQGAGHMAMALEDRYGIVMDTLEIDPAVAEAAIRYFGFSPTGKAIIGDARYEIRRLKGPYDLIIHDCFTGGAEPVHLLTIETLTRLRSLLSEQGILALNFVSFSENGKNTALASIAKTLAHAFPHQMVFASEPGKDFNDFIFLAANRPIDLDVNTLTLEKISWLKQRLMIVDKTQGILLTDNFNPLEHLQVRKAKHYRNILVNWLGTDILVR GT:EXON 1|1-517:0| BL:SWS:NREP 1 BL:SWS:REP 243->410|SPEE_VIBVY|1e-16|38.1|168/300| TM:NTM 8 TM:REGION 12->34| TM:REGION 42->64| TM:REGION 74->96| TM:REGION 99->121| TM:REGION 124->146| TM:REGION 149->171| TM:REGION 176->197| TM:REGION 204->226| SEG 75->95|tglsliialaalltllipwlt| SEG 155->167|stlgsvvgtlllg| SEG 179->196|ifivlglvlfllaiavaf| BL:PDB:NREP 1 BL:PDB:REP 275->374|1inlD|3e-05|31.0|100/282| RP:PDB:NREP 1 RP:PDB:REP 239->430|3c6kD|5e-14|16.5|182/348| RP:PFM:NREP 1 RP:PFM:REP 280->429|PF01564|7e-09|33.8|148/226|Spermine_synth| GO:PFM:NREP 1 GO:PFM GO:0003824|"GO:catalytic activity"|PF01564|IPR001045| RP:SCP:NREP 1 RP:SCP:REP 284->436|1inlA|2e-13|23.9|142/285|c.66.1.17| HM:SCP:REP 13->205|1pw4A_|0.00027|22.5|182/447|f.38.1.1|1/1|MFS general substrate transporter| HM:SCP:REP 239->437|2o07A1|8.6e-29|29.2|192/0|c.66.1.17|1/1|S-adenosyl-L-methionine-dependent methyltransferases| OP:NHOMO 88 OP:NHOMOORG 85 OP:PATTERN -------------------------------------------------------------------1 ----------------------------------------------------------------------1-----------------------------------------------------------------11111---1----1---11------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2----------------------------------------------------------1-------------1-----------------------------------------1------------------------------------------------------------------------1--1---1--------------1--1---------------------------------2--2-----------------------1-----------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------11-----------------------------------------------------------------------1- ------------111-111111111111111111--11-11111111111111111111111---------------------------1111111---111---------------------------------------------------------------------------------1-----1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 199 STR:RPRED 38.5 SQ:SECSTR ##############################################################################################################################################################################################################################################EEEEEEEccccEEEEEEETT#TEEEEEETTE##TEEEEETTcTcHHHHHHHTTTTccccTTcEEEEEEcTTcHHHHHHHTTcccEEEEEEccHHHHHHHHHHccccGGGEEEEccHHHHHHHHTccEEEEEEEccccccccHHHHHHHHHHHHHHTEEEEEEEEEEEEETTcHHcHHHHHHHHHHTTcccccEEEEEEcGHT############################################################################# DISOP:02AL 1-2| PSIPRED ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccEEEEEEEEccccEEEEEEcccEEcEEEEccccHHHHHHHHHHHHHHccccccEEEEEEccHHHHHHHHHHccccEEEEEEccHHHHHHHHHHcccccccEEEEHHHHHHHHcccccccEEEEEcccccccccccccHHHHHHHHHHcccccEEEEEEccccccccHHHHHHHHHHHHHHcccEEEEEEcccccccEEEEEEccccccccccHHHHHccccccHHHHHHHHccccEEEcccccHHHHHHHcccHHHHHHHHHHHHHHccc //