[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57734.1
DDBJ      :             Glycosyl transferase, family 2
Swiss-Prot:             

Homologs  Archaea  17/68 : Bacteria  298/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.68.1
:278 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->199 2z87B PDBj 5e-13 26.2 %
:RPS:PDB   9->193 3bcvA PDBj 5e-17 19.2 %
:RPS:SCOP  10->209 1h7lA  c.68.1.1 * 5e-21 20.2 %
:HMM:SCOP  10->215 1qg8A_ c.68.1.1 * 6.7e-41 30.1 %
:RPS:PFM   13->129 PF00535 * Glycos_transf_2 1e-12 31.9 %
:HMM:PFM   13->140 PF00535 * Glycos_transf_2 5.1e-25 24.2 128/169  
:BLT:SWISS 8->209 CHS_PASMU 3e-14 26.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57734.1 GT:GENE ABA57734.1 GT:PRODUCT Glycosyl transferase, family 2 GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1351090..1351926 GB:FROM 1351090 GB:TO 1351926 GB:DIRECTION + GB:PRODUCT Glycosyl transferase, family 2 GB:PROTEIN_ID ABA57734.1 GB:DB_XREF GI:76883053 InterPro:IPR001173 LENGTH 278 SQ:AASEQ MRKVANLKLPTISIVTPSLNQGEYVEWTVRSVFEQRYPNLEYIFMDGGSTDQTLDRIASYRNRFLHFESGPDGGQSAAIAKGFSIATGEIMAYLNSDDVLLPGTLNFVADYFHRHPEVDFLYGHRCIVNEINQVIGHWILPRHSSFLMRRWDLIPQESCFWRRRLFEQKGNIDASFQFAMDYDLFVRYMDVGNFKRVNRFLSAFRVHKDAKTTTQLTTTGWAEIERVQRSNQMRFPPLLGKLFPLSVQLRSLLFIRRGECFPGLPPGSNFNLNILWGD GT:EXON 1|1-278:0| BL:SWS:NREP 1 BL:SWS:REP 8->209|CHS_PASMU|3e-14|26.2|202/965| SEG 212->219|tttqlttt| BL:PDB:NREP 1 BL:PDB:REP 8->199|2z87B|5e-13|26.2|191/591| RP:PDB:NREP 1 RP:PDB:REP 9->193|3bcvA|5e-17|19.2|182/192| RP:PFM:NREP 1 RP:PFM:REP 13->129|PF00535|1e-12|31.9|116/148|Glycos_transf_2| HM:PFM:NREP 1 HM:PFM:REP 13->140|PF00535|5.1e-25|24.2|128/169|Glycos_transf_2| RP:SCP:NREP 1 RP:SCP:REP 10->209|1h7lA|5e-21|20.2|198/239|c.68.1.1| HM:SCP:REP 10->215|1qg8A_|6.7e-41|30.1|206/255|c.68.1.1|1/1|Nucleotide-diphospho-sugar transferases| OP:NHOMO 588 OP:NHOMOORG 317 OP:PATTERN --------------------------------11------11--1-1-12112--11112----1--- -16-----22------111-1-----22222--111-1-11-----------1------------1-----1--------1-----1-3524-311---1-3221-46-3--------------1112-2123341322-2------47B553----1------2-48936--------1-1----1------11-1-12311121322-2--2-211----1-11--1113--------------------11---11--111-----21--------111--------------------------------------------31----1---2-1----1----1--11-112121--11----------121--------221----1--111------------22-2222--1--211-34224132--11----1---------------11-1321------------11---1111-1-------111----------12------------------------1---22-1--1-11---12------------1-1111-2151-46241221158543494223242-22----1---2--111111111--122---11-212-----------1--------------3112---------------------------2-------------------2-1--------------------1------1111111111-1--1----------3--------1---------2----------22222211111---1-2115------------1------------11111111----2-1-225544--------1---------------------------1--1-------53 -----------------------------------------------------------------------------------------------------------1--------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 260 STR:RPRED 93.5 SQ:SECSTR #HHHHHTTcccEEEEEEEcccTTTHHHHHHHHHTcccccEEEEEEEccccccHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHccccEEEEccTTccccTTHHHHHHHHHTccEEEccEEEccHHHHHHHHHHHGGGTcccHHHHHHHHHHHTcccEEEEHHHHHHTTcccTTTcTTHHHHHHHHHHTTccGGGEEEEEEEEcEEccccGGGHHHHHHHHHHHHHHHHHHHHHTTccccccccEEEEEccTTcccEEEE################# DISOP:02AL 1-7, 211-214| PSIPRED ccccccccccEEEEEEEEcccHHHHHHHHHHHHHccccccEEEEEEcccccHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHcccEEEEEccEEEEcccccEEcccccccHHHHHHHcccccccccEEEEHHHHHHHccccccccHHHHHHHHHHHHHcccEEEEccEEEEEEEccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHccc //