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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57747.1
DDBJ      :             cytochrome/quinol oxidase subunit 3
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  184/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
f.25.1
:214 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   25->209 1v54C PDBj 4e-12 30.6 %
:RPS:SCOP  24->210 1fftC  f.25.1.1 * 3e-24 23.6 %
:HMM:SCOP  16->213 1fftC_ f.25.1.1 * 1.8e-44 34.1 %
:RPS:PFM   25->209 PF00510 * COX3 2e-06 28.0 %
:HMM:PFM   22->210 PF00510 * COX3 4.4e-19 31.0 174/258  
:BLT:SWISS 18->211 QOX3_BACSU 3e-15 28.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57747.1 GT:GENE ABA57747.1 GT:PRODUCT cytochrome/quinol oxidase subunit 3 GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1366095..1366739 GB:FROM 1366095 GB:TO 1366739 GB:DIRECTION + GB:PRODUCT cytochrome/quinol oxidase subunit 3 GB:PROTEIN_ID ABA57747.1 GB:DB_XREF GI:76883066 InterPro:IPR000298 LENGTH 214 SQ:AASEQ MSDKHTAVAEQFDDPEQEYHAATLGMWVFLATEVLFFGVLFASYAVSRFNYPEAFAEASRHTDIVLGTISTGVLLTSGFTMALAVRSAKLGRDKAIIGFLVLTILLAIAFLFIEGTEYYQAYGEQLIPAFNFMYEGAHEKPVELFFFLYFLMTGMHAVHVTIGILIMAAIAIMAGRRRFTSYYYTPVELTGLYWAFVDIVWIFLYPLFYLVART GT:EXON 1|1-214:0| BL:SWS:NREP 1 BL:SWS:REP 18->211|QOX3_BACSU|3e-15|28.7|181/204| TM:NTM 5 TM:REGION 23->45| TM:REGION 64->86| TM:REGION 95->116| TM:REGION 148->170| TM:REGION 190->212| SEG 99->113|flvltillaiaflfi| SEG 162->175|igilimaaiaimag| BL:PDB:NREP 1 BL:PDB:REP 25->209|1v54C|4e-12|30.6|170/259| RP:PFM:NREP 1 RP:PFM:REP 25->209|PF00510|2e-06|28.0|168/212|COX3| HM:PFM:NREP 1 HM:PFM:REP 22->210|PF00510|4.4e-19|31.0|174/258|COX3| GO:PFM:NREP 3 GO:PFM GO:0004129|"GO:cytochrome-c oxidase activity"|PF00510|IPR000298| GO:PFM GO:0006123|"GO:mitochondrial electron transport, cytochrome c to oxygen"|PF00510|IPR000298| GO:PFM GO:0016020|"GO:membrane"|PF00510|IPR000298| RP:SCP:NREP 1 RP:SCP:REP 24->210|1fftC|3e-24|23.6|174/185|f.25.1.1| HM:SCP:REP 16->213|1fftC_|1.8e-44|34.1|185/185|f.25.1.1|1/1|Cytochrome c oxidase subunit III-like| OP:NHOMO 210 OP:NHOMOORG 194 OP:PATTERN 11----------------------1----1-------------------------------------- -12----11111--11111-1-1111111111111111-----1---1------------------------------------------------------------11--------------1-----------111-------------1--------------------------------------2-1---------------111111----1-1---111111-1---------------1------------------------------------------------------------------------------------------------------1-----------------------1-------------11----11-1111111111--11211112-1--11111-1-1-111-----------------------11--------------------------------------1-----1--------------2---------13------1---22---11-1---11-1-----------1-11-----11---111-1---111--221222------------------------------1-1--2------111-1-11111--11-1---1---------1--1-11---------------------------------------1-------------------------11111111111----11111------------------------------------111111---1111-111-------------1----------1-----------------111111-----------------------------------------------2- ----------------------------------------------------------------------------------------------------------------1-1-1-----1--------------------11------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 180 STR:RPRED 84.1 SQ:SECSTR ########################HHHHHHHHHHHHHHHHHHHHHHHHcccGGccccTTcccTTcHHHHHHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHc#######cccTTHcHHHHHHcccTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccccccHHHHHHHHHHHHHHHHHHHHHHHTTcc### DISOP:02AL 1-3| PSIPRED cccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //