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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57748.1
DDBJ      :             Caa(3)-type oxidase, subunit IV
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  145/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.3.1
:230 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   147->219 2zonG PDBj 2e-13 40.3 %
:RPS:PDB   127->220 3dp5A PDBj 3e-12 17.2 %
:RPS:SCOP  131->220 1kb0A1  a.3.1.6 * 1e-12 17.0 %
:HMM:SCOP  142->222 1kx2A_ a.3.1.1 * 6.7e-18 38.3 %
:HMM:PFM   145->193 PF00034 * Cytochrom_C 3.5e-08 26.5 49/91  
:HMM:PFM   16->91 PF09922 * DUF2154 0.00039 17.4 69/233  
:HMM:PFM   102->154 PF11871 * DUF3391 0.00083 26.4 53/128  
:BLT:SWISS 147->223 C555_CHLTE 2e-18 50.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57748.1 GT:GENE ABA57748.1 GT:PRODUCT Caa(3)-type oxidase, subunit IV GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1366736..1367428 GB:FROM 1366736 GB:TO 1367428 GB:DIRECTION + GB:PRODUCT Caa(3)-type oxidase, subunit IV GB:PROTEIN_ID ABA57748.1 GB:DB_XREF GI:76883067 InterPro:IPR002323 InterPro:IPR003088 InterPro:IPR011743 LENGTH 230 SQ:AASEQ MKGRDIASWKTQLWVWVILIILLLGTFGSAYISLGPFNLVINIFIAIGQTLLVLTFFMHLRYRDHLVRIFAAAGFFWLLLLFVFTLSDYITRLEPVSANKLVYVYPGVSAKEQPDHPPPSSQKRVEASPQAAQLKSQLSRKVNLKRGKKVYQETCFACHGTGALGAPKKGDKAAWSKRATQGLETLVTHAMNGYKAMPPKGGNQKLNVNEIRSGVVYMLTESEVVLGQKK GT:EXON 1|1-230:0| BL:SWS:NREP 1 BL:SWS:REP 147->223|C555_CHLTE|2e-18|50.6|77/108| TM:NTM 3 TM:REGION 11->33| TM:REGION 39->61| TM:REGION 76->98| SEG 13->24|lwvwviliilll| SEG 70->86|faaagffwllllfvftl| BL:PDB:NREP 1 BL:PDB:REP 147->219|2zonG|2e-13|40.3|72/81| RP:PDB:NREP 1 RP:PDB:REP 127->220|3dp5A|3e-12|17.2|93/99| HM:PFM:NREP 3 HM:PFM:REP 145->193|PF00034|3.5e-08|26.5|49/91|Cytochrom_C| HM:PFM:REP 16->91|PF09922|0.00039|17.4|69/233|DUF2154| HM:PFM:REP 102->154|PF11871|0.00083|26.4|53/128|DUF3391| RP:SCP:NREP 1 RP:SCP:REP 131->220|1kb0A1|1e-12|17.0|88/97|a.3.1.6| HM:SCP:REP 142->222|1kx2A_|6.7e-18|38.3|81/81|a.3.1.1|1/1|Cytochrome c| OP:NHOMO 203 OP:NHOMOORG 145 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------22222323222----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-1111111121111111222222111--12--2222-111-11111---3-11212211111--1222--------------------------------1-------------------1---1--11-111-11111----111----1-11-11---21-1--------------------------------------------------------------------------------------------2-----2222121-1----------------------112113323224212222-1------------111111111111111111111111--------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 118 STR:RPRED 51.3 SQ:SECSTR ###########################################################################################################ccHHHHccccc####cccccTTccccccccGGGccccccHHHHHHHHTTTTcGGGccccTccccHHHHHHTTcccHHHHHHHTTcccTTcccEccTTTccHHHHHHHHHHHHHHTcHHHHHH# DISOP:02AL 1-3, 225-230| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccHHHHHHHHHHHHcccccccccHHHHHHHHccccccHHHcccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHcccccccc //