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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57770.1
DDBJ      :             TonB-dependent receptor
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  368/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
f.4.3
:710 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   41->525 2hdiA PDBj 4e-24 31.2 %
:RPS:PDB   41->710 1by3A PDBj 5e-46 16.0 %
:RPS:SCOP  46->710 1kmoA  f.4.3.3 * 3e-53 19.4 %
:HMM:SCOP  40->710 1fepA_ f.4.3.3 * 4.3e-115 26.6 %
:RPS:PFM   55->164 PF07715 * Plug 8e-16 40.0 %
:RPS:PFM   472->709 PF00593 * TonB_dep_Rec 5e-11 28.8 %
:HMM:PFM   466->709 PF00593 * TonB_dep_Rec 3.9e-34 25.4 236/277  
:HMM:PFM   56->164 PF07715 * Plug 1.7e-26 41.3 104/108  
:BLT:SWISS 41->677 BTUB_VIBHB 1e-24 29.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57770.1 GT:GENE ABA57770.1 GT:PRODUCT TonB-dependent receptor GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1400009..1402141 GB:FROM 1400009 GB:TO 1402141 GB:DIRECTION + GB:PRODUCT TonB-dependent receptor GB:PROTEIN_ID ABA57770.1 GB:DB_XREF GI:76883089 InterPro:IPR000531 LENGTH 710 SQ:AASEQ MYFSLITRSIFCLLMFYAVNALAISLEADDEEALLSLYGDEEMISLATGNSKPISRAPAIATVITAEDIKEIGATDIDQVLETVPGLHVARSPRGYNPIYTFRGIFSQFNSQVLMLINGIPITNLFAGDRNQVWGGLPVQSIARVEVIRGPGSAIYGADAFAGVINIITKAKEDIAGTEVGGRAGSFNSWDGWALHGDSWGGFDVAVMLEYGDTDGQRRTIDEDAQTFFDSQFNTDASLAPGSVNLQRENFDARVDISREHWRLRAGLQRRQNVGTGAGVAQALDPSGRFASDRWNADLTYHNPEFFSENWDVTAQLSYFNTSQEVEQNVRLFPPGADFNSAPGIDFPEGVIGNPEVFERHARFKVSTFYTGFEQHQIHAGTGMRYGDLYDVKEVKNYEFDFETGLPRPLGGLRDVTGDLSQVFLRERDRKNYYVFLQDVWNFANDWEFTAGVRYDHFSDFGDTVNPRLALVWATRYNLTTKLLYGRAFRAPSFAELFNINNPVAIGNPNLDPETIETVELAFDYRPSNALRLALSLFHYRWDDIIQFVSDPGTSVNVAENAGRQKGFGMELEADWALTSNFHLLGNYAFQHSTDEKTGKNAGHAPQHQIYLRGSWEFLPHWRLTPQFNWVIDRSRTASDSRPAINNYSIFDLTLRRTAIKRHWEVAFSVRNLFDSDAREPSPAGNPGALIPNDLPLSGRSFFGEIRFRF GT:EXON 1|1-710:0| BL:SWS:NREP 1 BL:SWS:REP 41->677|BTUB_VIBHB|1e-24|29.0|551/617| TM:NTM 1 TM:REGION 4->25| SEG 21->37|alaisleaddeeallsl| BL:PDB:NREP 1 BL:PDB:REP 41->525|2hdiA|4e-24|31.2|397/598| RP:PDB:NREP 1 RP:PDB:REP 41->710|1by3A|5e-46|16.0|656/695| RP:PFM:NREP 2 RP:PFM:REP 55->164|PF07715|8e-16|40.0|105/108|Plug| RP:PFM:REP 472->709|PF00593|5e-11|28.8|233/268|TonB_dep_Rec| HM:PFM:NREP 2 HM:PFM:REP 466->709|PF00593|3.9e-34|25.4|236/277|TonB_dep_Rec| HM:PFM:REP 56->164|PF07715|1.7e-26|41.3|104/108|Plug| GO:PFM:NREP 8 GO:PFM GO:0004872|"GO:receptor activity"|PF07715|IPR012910| GO:PFM GO:0005215|"GO:transporter activity"|PF07715|IPR012910| GO:PFM GO:0006810|"GO:transport"|PF07715|IPR012910| GO:PFM GO:0016020|"GO:membrane"|PF07715|IPR012910| GO:PFM GO:0004872|"GO:receptor activity"|PF00593|IPR000531| GO:PFM GO:0005215|"GO:transporter activity"|PF00593|IPR000531| GO:PFM GO:0006810|"GO:transport"|PF00593|IPR000531| GO:PFM GO:0016020|"GO:membrane"|PF00593|IPR000531| RP:SCP:NREP 1 RP:SCP:REP 46->710|1kmoA|3e-53|19.4|612/661|f.4.3.3| HM:SCP:REP 40->710|1fepA_|4.3e-115|26.6|629/0|f.4.3.3|1/1|Porins| OP:NHOMO 1028 OP:NHOMOORG 371 OP:PATTERN -------------------------------------------------------------------- -13------------------------------------------------------------------------------------17723-334----221124-62----------------22-4-1211B8----------3--1---1---------2--9291---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-32-844A---------23322212111111111112-2--11132--2--22-----------5221-71233-----------111---62------------------------------1533-3322112212321111---21111112114132--21315222612131352512322-------1-1258147112---11----21153234A--1-64124243-111121-1-11--111--31--321534425213788849A786A4576977---2333------412114-2455233322-422232622343311221233334333223222222222322231111122--334444444444---1---------23524----21---------22212-2122353333362323333311----------1133222222533226731411333------3-332233-----------------------------------------------1- --------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------1-----7---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 670 STR:RPRED 94.4 SQ:SECSTR ########################################GGEEcTTTcccEEGGGccccEEEEEHHHHHHHcccccGGGGTTcccEEccTTTTcccccccEETTcccGGGcccEEcccccccccTTcccccccccccGGGEEEEEEEEcccHHHHccccTTEEEEEEEcccccccEEEEEEEEETTTEEEEEEEEEEEcccEEEEEEEEEEEEEcccTTcEEEEEEEEEEEEEcccTTEEEEEEEEEEEEcccccccTcccTTcccccTTcccccTTcEEEEEEEEEEEccccEEEEEEEEEEEEEEEEEEEEEEEETTcGGGTTcHHHHTccTTGGGcEEEEEEEEEEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEEcTTccccEETTcccccccccccccTTTEEEEEEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEEETTTccEEEEEEEEEEEEEEEEEccTTcEEEEEEEEEccccccTTccccccEEEEEEEEEEEEccccEcccEEEEEEEEEEEEEEEEEccccEcccEEEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEcTTTTcccTTcccEEEEEEEEEEEcTTTTEEEEEEEEEEccEEccTTcccEccEEEEEEEEETTTTccccEEEEEEEcTTccccEEEEEETTTccEETEEEEccccEEEEEEEEEc DISOP:02AL 30-36| PSIPRED ccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEcccccHHHccEEEEEEcHHHHHHcccccHHHHHHHcccEEEEccccccccEEEEEEEcccccccEEEEEcEEEEccccccccccccccccHHHccEEEEEEcccccccccccccEEEEEEEcccccccEEEEEEEEEEcccEEEEEEEccccccEEEEEEEEEEccccEEEccccccccccccccccccEEEEEEEEEEcccccEEEEEEEcccccccccccccccccccccccccccccccccccEEEEEEEEccEEccccEEEEEEEEEEEEEEEEEEEEEEEccccccccccccccccccccccEEEEEEccEEEEEEEcccEEEEEEEEEEEEEEEcEEEEEccccccccccccccccccccccccccccccccccEEEEEEEEEEEEEEEcccEEEEEEEEEEEEEccccEEEEEEEEEEEEcccEEEEEEEEEEEEcccccccccccccccccccccccEEEEEEEEEEEEEccccEEEEEEEEEEEEEEEEEEEEcccccEEEEEEcccEEEEEEEEEEEEEEcccEEEEEEEEEEEEEEccccccccccccEEEEEEEEEEEcccEEEEEEEEEEEEEEcccccccEEcccEEEEEEEEEEEEEcccEEEEEEEEEEEccEEEEEEcccccccccccccccccEEEEEEEEEEc //