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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57815.1
DDBJ      :             2,3-dimethylmalate lyase
Swiss-Prot:             

Homologs  Archaea  25/68 : Bacteria  324/915 : Eukaryota  65/199 : Viruses  0/175   --->[See Alignment]
c.1.12c.68.1
:556 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   18->302 1s2tB PDBj e-104 61.8 %
:BLT:PDB   312->539 2ggoA PDBj 2e-07 26.9 %
:RPS:PDB   6->217 3e5bA PDBj 1e-21 18.9 %
:RPS:PDB   312->369 2e3dC PDBj 3e-11 29.3 %
:RPS:SCOP  20->304 1m1bA  c.1.12.7 * 3e-27 61.4 %
:RPS:SCOP  312->421 1jykA  c.68.1.13 * 3e-17 26.4 %
:HMM:SCOP  16->306 1pymA_ c.1.12.7 * 4.7e-84 34.7 %
:HMM:SCOP  307->548 1jykA_ c.68.1.13 * 1.2e-28 26.7 %
:RPS:PFM   91->173 PF00463 * ICL 8e-06 34.6 %
:RPS:PFM   312->370 PF00483 * NTP_transferase 7e-08 39.0 %
:HMM:PFM   312->369 PF00483 * NTP_transferase 0.00012 24.1 58/248  
:HMM:PFM   91->128 PF00463 * ICL 0.00012 36.8 38/526  
:BLT:SWISS 18->302 PEPM_MYTED e-103 61.8 %
:BLT:SWISS 312->548 GLMU_META3 3e-11 29.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57815.1 GT:GENE ABA57815.1 GT:PRODUCT 2,3-dimethylmalate lyase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(1465505..1467175) GB:FROM 1465505 GB:TO 1467175 GB:DIRECTION - GB:PRODUCT 2,3-dimethylmalate lyase GB:PROTEIN_ID ABA57815.1 GB:DB_XREF GI:76883134 LENGTH 556 SQ:AASEQ MSTVPLPTAGTFKRRPSKFAQLRALLKSEPTEFLLEAHNGLSARIAEEAGFKGVWASGLAISSQFGVRDNNEASWTQIVDMLEFMSDTTTIPILLDGDTGYGNFNNLRRLVRKLEQREIAGVCIEDKVFPKTNSFIGGERQPLAEVDEFCGKIKAGKDSQSDPDFSIVARVEALIAGWGLDEALRRAEAYHRAGADAILIHSKLSQADEILAFAREWGNRAPLIIVPTKYYSTPTEVFRKAGISTVIWANHLIRAAAAAMAQVAREIHDTQTLVNIEDQVAPVSEIFRLQGAEELLAAERRYGASPEAETGAIVLGATRGKGLESLTQDRPKVMLPVAGIPLLRRLVDEFKRQHVNRITVVTGYKPEAIDVKAISLIHNPDYGHSSELSSLACALESLSEDTIITYGDLLFRSYILNDLRHVPGNIVVVVDSALSPGMKDDIRDVAFCSQPDDRSLFRQDVDLLRIETQKKQLSKQPHGRWIGMARVAGEGRQWLLDALQALRQQENFSQLAMPDLFNHLVANGHPIKVLYINGHWLDVNDMEDLTRAGDFAHGHQ GT:EXON 1|1-556:0| BL:SWS:NREP 2 BL:SWS:REP 18->302|PEPM_MYTED|e-103|61.8|285/295| BL:SWS:REP 312->548|GLMU_META3|3e-11|29.0|214/411| SEG 249->264|anhliraaaaamaqva| SEG 385->400|sselsslacaleslse| BL:PDB:NREP 2 BL:PDB:REP 18->302|1s2tB|e-104|61.8|285/291| BL:PDB:REP 312->539|2ggoA|2e-07|26.9|201/401| RP:PDB:NREP 2 RP:PDB:REP 6->217|3e5bA|1e-21|18.9|201/397| RP:PDB:REP 312->369|2e3dC|3e-11|29.3|58/288| RP:PFM:NREP 2 RP:PFM:REP 91->173|PF00463|8e-06|34.6|81/176|ICL| RP:PFM:REP 312->370|PF00483|7e-08|39.0|59/238|NTP_transferase| HM:PFM:NREP 2 HM:PFM:REP 312->369|PF00483|0.00012|24.1|58/248|NTP_transferase| HM:PFM:REP 91->128|PF00463|0.00012|36.8|38/526|ICL| GO:PFM:NREP 4 GO:PFM GO:0003824|"GO:catalytic activity"|PF00463|IPR000918| GO:PFM GO:0008152|"GO:metabolic process"|PF00463|IPR000918| GO:PFM GO:0009058|"GO:biosynthetic process"|PF00483|IPR005835| GO:PFM GO:0016779|"GO:nucleotidyltransferase activity"|PF00483|IPR005835| RP:SCP:NREP 2 RP:SCP:REP 20->304|1m1bA|3e-27|61.4|285/291|c.1.12.7| RP:SCP:REP 312->421|1jykA|3e-17|26.4|110/229|c.68.1.13| HM:SCP:REP 16->306|1pymA_|4.7e-84|34.7|291/0|c.1.12.7|1/1|Phosphoenolpyruvate/pyruvate domain| HM:SCP:REP 307->548|1jykA_|1.2e-28|26.7|217/0|c.68.1.13|1/1|Nucleotide-diphospho-sugar transferases| OP:NHOMO 569 OP:NHOMOORG 414 OP:PATTERN 11----1111111111-12111------1-13-----------------------------111--13 -----1-1222---111-------14-----------1-11221111--111311111--1---------------------1-----211------------------------------------------------------2---1----------1-1----11-1--------------------1-1111111111121112111111111---11--11111--1----------------------------------------------------------------------------------------------1-------1-----------1---------------1------------1----------123--123112----------1---1--2--121-1--3--------1-1--21-----1-1111111111-----11-----------------------------1--2--464132223222222222323233-23271213--111--1111-1-2211---1-111111111-11-1-11-----------------1-212-----2--1-------1---1--------------21-11-111111222221111121121111---2-2-------1---11-1111111111-11-111111111111-111---1112-1111111111111111------------------------11111111111-1122---------------11111111111-11112231221121212-----------1-1111111111112-1-11-------------------------1---------------------------------1------ -----1--------1211122214343---------1111111---21121354-----111------------1--------------231111------------121------------------------------------------------------1--------1-122--121-112321611221221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 547 STR:RPRED 98.4 SQ:SECSTR ###HHcccccHHHHHHHHHHHHHHHHHHcccEEEEccccHHHHHHHHHTTcccEEEcHHccTTcccccccccccTTHHHHHHHHHcccccccEEEEcTTccccHHHHHHHHHHHHHHTccEEEEEccccccccccccccccEEccHHHHHHHHHHHHHHHHTcccEEEEEEcTTTccEEcccccTTTGGGccTTccccTTccEEccccHHHHHHHHHHHGGGccEEEcGGGccHHHHHHHTTEEEEEcccHHHHHHHHHHHHHHHHHHTcccHHTcccccccHHHHHHTTcHHHHHHHHHHHcc#cGGcEEEEEEcccccGGGTTGGGcccGGGcEETTEEHHHHHHHHHHHTTccEEEEEEcGGGHHHHHHHHHccHHHHHHHHTccTTcEEEEEEccccccHHHHHHHTHHHHcccTEEEcTTcccTTTcTHHHHHHHHHccEEEEEEEccGGGccTTccccTTcEEEEcEEEEcccTTTccccEEEEEEEEEcTHHHHHTcccccHHccHHHHHHHHHHHcccEEEEEccccEEEcccHHHHHHHHHH##### DISOP:02AL 1-5, 7-21| PSIPRED cccccccccccccccHHHHHHHHHHHHccccEEEEccccHHHHHHHHHccccEEEEHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccEEcHHHHHHHHHHHHHHHccccEEEEEEEEHHHHcccHHHHHHHHHHHHHHcccEEEcccccccHHHHHHHHHHHcccccEEEEccccccccHHHHHHccccEEEEccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccEEEEEcccccccccHHHccccccEEEEccccHHHHHHHHHHHccccEEEEEEccHHHHHHHcccEEEEEEcccccccHHHHHHHHHHHcccEEEEEcHHHHHHHHHHHHHHccccEEEEEEEcccccccccccEEEEEEcccccccEEEEcEEEEEcccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccEEHHHHHHHHHHccccEEEEEEEEEEEEcccHHHHHHHHHHHHccc //