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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57819.1
DDBJ      :             farnesyl-diphosphate farnesyltransferase
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  67/915 : Eukaryota  76/199 : Viruses  0/175   --->[See Alignment]
a.128.1
:366 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   25->292 1ezfC PDBj 7e-10 26.9 %
:RPS:PDB   25->283 2e93A PDBj 5e-14 11.4 %
:RPS:SCOP  20->321 1ezfA  a.128.1.2 * 1e-43 22.7 %
:HMM:SCOP  12->325 1ezfA_ a.128.1.2 * 3.6e-54 25.8 %
:RPS:PFM   25->272 PF00494 * SQS_PSY 6e-15 31.8 %
:HMM:PFM   23->312 PF00494 * SQS_PSY 4.2e-48 28.4 257/267  
:BLT:SWISS 25->295 FDFT_CANGA 3e-17 29.5 %
:PROS 160->175|PS01044|SQUALEN_PHYTOEN_SYN_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57819.1 GT:GENE ABA57819.1 GT:PRODUCT farnesyl-diphosphate farnesyltransferase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(1470781..1471881) GB:FROM 1470781 GB:TO 1471881 GB:DIRECTION - GB:PRODUCT farnesyl-diphosphate farnesyltransferase GB:PROTEIN_ID ABA57819.1 GB:DB_XREF GI:76883138 InterPro:IPR002060 LENGTH 366 SQ:AASEQ MMGSYHTSYDSADKNYQDYILPGVSRTFALTIPQLPPPLQEVVANGYLLCRIADTIEDEPTLSIAQKKYFSNLFVTVVAGQTSAESFACSLYPLLSEHTLAAERELIQNAPRILRITYSFNPRQRAALERCVCIMCDGMPRFQNTASLRGLADMEAMDQYCYFVAGVVGEMLTELFCDYSPGINRNREALRNLMVSFGQGLQMTNILKDIWDDRKRRICWLPRTVFEQAGFNLDNLEPGHYQSAFGDGLQHLIGVTHAHLRNALTYTLLIPPEEGGIRRFCLWAIGLAMLTLRKLHRRRNFSASWQVKISRRSVKTTILLTSIAANHDKVLTFLFNLASKGVPFIPLKVNSNDSKQTSMPQASPEK GT:EXON 1|1-366:0| BL:SWS:NREP 1 BL:SWS:REP 25->295|FDFT_CANGA|3e-17|29.5|258/443| PROS 160->175|PS01044|SQUALEN_PHYTOEN_SYN_1|PDOC00802| BL:PDB:NREP 1 BL:PDB:REP 25->292|1ezfC|7e-10|26.9|242/320| RP:PDB:NREP 1 RP:PDB:REP 25->283|2e93A|5e-14|11.4|237/299| RP:PFM:NREP 1 RP:PFM:REP 25->272|PF00494|6e-15|31.8|211/257|SQS_PSY| HM:PFM:NREP 1 HM:PFM:REP 23->312|PF00494|4.2e-48|28.4|257/267|SQS_PSY| GO:PFM:NREP 2 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00494|IPR002060| GO:PFM GO:0016740|"GO:transferase activity"|PF00494|IPR002060| RP:SCP:NREP 1 RP:SCP:REP 20->321|1ezfA|1e-43|22.7|282/323|a.128.1.2| HM:SCP:REP 12->325|1ezfA_|3.6e-54|25.8|291/0|a.128.1.2|1/1|Terpenoid synthases| OP:NHOMO 168 OP:NHOMOORG 150 OP:PATTERN ------------------------1111111------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------1111111-----------111111--------------1-----1-------------------------------11--------1-------------------1-------------------------------------------------------------------------------------------------------------1----------1-----------------------------------------------------------------------------------------------------------------------------------1111111111111111111-11111111-1------------------------------111------------------------------------------------------------11--1------------------------------111---------------------------------------------------------------------------------------------------11111-----------------------------1-----------------------------------------------------------1----------------1-------------------------------------1 ----11---11----1111-11--1-11111111----------1111--1-11-----111-111-1111-11-111111111-111-11-1------1-1-1-1---1--1-11------1---------------------------------------1-----------11-11I11--1-1--11-11----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 289 STR:RPRED 79.0 SQ:SECSTR ccHHHHHHHHHH###HHHHHTcTTHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHTccEETTEEcccHHHHHHHHHcHHHHHHHHHHHHHHHHHHGGGccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcTTcccccHHHHHHHHHHTHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcHHHTTcccHHHHHHHHHHHHTTcHHHHHHHHHHHHHTcccHHHHHHHHHcHHHHHHHHHHHHHHHHHTccGHHHHHHHHH########################################################################## DISOP:02AL 1-10, 351-366| PSIPRED cccccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccHHHHHHHHHccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEccHHHHHHHcccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccc //