[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57824.1
DDBJ      :             sterol desaturase-related protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  191/915 : Eukaryota  39/199 : Viruses  0/175   --->[See Alignment]
:270 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   79->192 PF04116 * FA_hydroxylase 2e-07 30.4 %
:HMM:PFM   80->193 PF04116 * FA_hydroxylase 1.2e-22 33.9 112/114  
:BLT:SWISS 55->217 TM195_XENTR 2e-14 35.1 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57824.1 GT:GENE ABA57824.1 GT:PRODUCT sterol desaturase-related protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(1474866..1475678) GB:FROM 1474866 GB:TO 1475678 GB:DIRECTION - GB:PRODUCT sterol desaturase-related protein GB:PROTEIN_ID ABA57824.1 GB:DB_XREF GI:76883143 InterPro:IPR006087 LENGTH 270 SQ:AASEQ MGFFLGIFGLMALWELAAPRRKLSVSKPVRWLNNLALVFFNTLLLRWLFPAAAVGMAVFASEHNWGLFNIYPLPLWWAVALSVLILDFAIWLQHVMFHAVPALWRLHRVHHADLDFDLTTGIRFHPLEIVLSMGIKFTAIAVLGPPVVAVIIFEILLNATSMFNHSNVYLPIPLDKILRRFLVTPDMHRVHHSVEDDETNSNFGFNLPWWDRLLGTYRDQPRAGHKTMDIGIHTFRNLCHCAWLPGMLRLPFIGRITDYAINRRQWPNRD GT:EXON 1|1-270:0| BL:SWS:NREP 1 BL:SWS:REP 55->217|TM195_XENTR|2e-14|35.1|151/446| TM:NTM 4 TM:REGION 1->19| TM:REGION 36->58| TM:REGION 75->97| TM:REGION 133->155| RP:PFM:NREP 1 RP:PFM:REP 79->192|PF04116|2e-07|30.4|112/114|FA_hydroxylase| HM:PFM:NREP 1 HM:PFM:REP 80->193|PF04116|1.2e-22|33.9|112/114|FA_hydroxylase| GO:PFM:NREP 5 GO:PFM GO:0005506|"GO:iron ion binding"|PF04116|IPR006694| GO:PFM GO:0005783|"GO:endoplasmic reticulum"|PF04116|IPR006694| GO:PFM GO:0006633|"GO:fatty acid biosynthetic process"|PF04116|IPR006694| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF04116|IPR006694| GO:PFM GO:0055114|"GO:oxidation reduction"|PF04116|IPR006694| OP:NHOMO 341 OP:NHOMOORG 230 OP:PATTERN -------------------------------------------------------------------- --1-----------1------2--22------2-122------------------------------1-2-------------------------------3-33212-2------------------111---21-------------2----------------1-111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1-----1-122------------------1---1----1-32-11111--11-11-11422------1-1--------111-1-1-------------------------------311--111--2222223-22222312222223232--1-2221-12--411-4---1----1---------------1----1--------21211--------42--1--------------------------11-212211211222212-1111-11-1-----11-1-------1--------1------------1------------1---11---------------------------------------------------12-124-1----------------------111--2222-11-1---1----1-111111--111-111111221111-------------12-22--11------------------------------------------------- ----23-----------------------------------------------------------------------------------------------------1-12231-1----1---11-1-121-1111-1---1-1111--1--1-1---11--512----1--12--------2----1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 265-270| PSIPRED cHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccEEEccccccccccEEEccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc //