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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57828.1
DDBJ      :             diguanylate cyclase/phosphodiesterase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  571/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
a.229.1c.1.33d.58.29
:584 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   74->289 1w25A PDBj 2e-05 25.1 %
:BLT:PDB   325->564 3ii8B PDBj 1e-33 37.3 %
:RPS:PDB   157->312 3breA PDBj 2e-14 21.8 %
:RPS:PDB   335->583 2basA PDBj 1e-49 20.8 %
:RPS:SCOP  68->141 1xn8A  a.229.1.1 * 2e-05 12.3 %
:RPS:SCOP  167->312 1w25A3  d.58.29.2 * 3e-15 20.5 %
:RPS:SCOP  340->581 2basA1  c.1.33.1 * 4e-56 20.8 %
:HMM:SCOP  167->312 1w25A3 d.58.29.2 * 1.8e-18 28.3 %
:HMM:SCOP  334->583 2basA1 c.1.33.1 * 5.4e-79 45.1 %
:RPS:PFM   164->312 PF00990 * GGDEF 2e-15 33.1 %
:RPS:PFM   335->570 PF00563 * EAL 3e-51 42.1 %
:HMM:PFM   336->570 PF00563 * EAL 8e-70 39.7 232/236  
:HMM:PFM   163->312 PF00990 * GGDEF 7.2e-16 27.3 150/161  
:BLT:SWISS 158->576 Y1727_PSEAE 1e-55 31.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57828.1 GT:GENE ABA57828.1 GT:PRODUCT diguanylate cyclase/phosphodiesterase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1479429..1481183 GB:FROM 1479429 GB:TO 1481183 GB:DIRECTION + GB:PRODUCT diguanylate cyclase/phosphodiesterase GB:PROTEIN_ID ABA57828.1 GB:DB_XREF GI:76883147 InterPro:IPR000160 InterPro:IPR001633 LENGTH 584 SQ:AASEQ MKEQSKVTWIEWRGSHPSQMESGKAPDKNDQYGKNRVMLLVNSSGNRALLANHLRPYCQLVEPNDPSLKPESFDLAIVDMEGLRQWQKQLLDAKQREEPVFLPVVLILSRSELKRRFKTFWDLIDEFILSPIERREFTERVSMLLRTRQLALTQRSHLAYLVNHDRLTGLPNQTLFMEHLIDSVRDASILNKQVYVTVVHIPLARTMRSLGHYGLERVVANCSTRLNAVLRDEVLLARLTTEEWGLIHRPGETLSRVLEICRRIQLLADEPIPVRGEHIRLAPRIGVGIYPDDSSDANGTLECAMAALSEDKGPAPVFYSRRIQHEALRFIRTESKLYEALEKEEFELWFQPQVSFETEKPVGVEALVRWRLPNGELAPPGEFLPVAASTGQILRIDRWVLEKACATMNAWRDDNIGLQRVSVNVTVEDIDAPDFVEFIKRALDQYQLPPPSLELELTETTFFKSSPANLEKLNLLRSEGISVAVDDFGKGYSSLNYLHKLPITTLKIDKEFIENAINNPTSAAIVETIVWLAKKFKLETVAEGIETKAQVEFLRSLGVTTAQGFFYSQPIPEAELREWIKYYR GT:EXON 1|1-584:0| BL:SWS:NREP 1 BL:SWS:REP 158->576|Y1727_PSEAE|1e-55|31.6|415/685| SEG 144->155|llrtrqlaltqr| SEG 448->461|lpppsleleltett| BL:PDB:NREP 2 BL:PDB:REP 74->289|1w25A|2e-05|25.1|211/454| BL:PDB:REP 325->564|3ii8B|1e-33|37.3|233/256| RP:PDB:NREP 2 RP:PDB:REP 157->312|3breA|2e-14|21.8|156/322| RP:PDB:REP 335->583|2basA|1e-49|20.8|240/393| RP:PFM:NREP 2 RP:PFM:REP 164->312|PF00990|2e-15|33.1|148/160|GGDEF| RP:PFM:REP 335->570|PF00563|3e-51|42.1|235/236|EAL| HM:PFM:NREP 2 HM:PFM:REP 336->570|PF00563|8e-70|39.7|232/236|EAL| HM:PFM:REP 163->312|PF00990|7.2e-16|27.3|150/161|GGDEF| RP:SCP:NREP 3 RP:SCP:REP 68->141|1xn8A|2e-05|12.3|73/131|a.229.1.1| RP:SCP:REP 167->312|1w25A3|3e-15|20.5|146/162|d.58.29.2| RP:SCP:REP 340->581|2basA1|4e-56|20.8|236/257|c.1.33.1| HM:SCP:REP 167->312|1w25A3|1.8e-18|28.3|145/0|d.58.29.2|1/1|Nucleotide cyclase| HM:SCP:REP 334->583|2basA1|5.4e-79|45.1|246/0|c.1.33.1|1/1|EAL domain-like| OP:NHOMO 5151 OP:NHOMOORG 576 OP:PATTERN -------------------------------------------------------------------- 81-47---111----3322-2822-122222-444425329778Z-------437-----762-63A4442----1----91667C56--------------------1---------------------------33343---33WLEEBB11-99---3--8E5-88C3------------B-41----46-666664561666666-1--1166643281BA11111166--------------------------3---------------------------------------------------------------4433911111115161J663343511--367515451----2-1113---52259941111124OHH757HDBEJ44554553546-LHHGG6CN7G31GEEGLNIMNNDCE79A72917A55782--------C994-N6G--------11111111111111111-----8A87296612A787995555488GM7777558AJ7EBL--GGDNAHABJ14W44EFJHENVLE-------76DLPR1363358956799A-767D682FA----12129553----------------FAFLD43JC7NOKQIRKaORRRUMSLQPOPLMKIOMM---CKAP------BC732F5DDDBDBEDCC-BDCEDCADCDCCCBCCCDDFFC66---A67AABAAAA9BAAAA697566A7--633333312333---F-1-1-BEDCB3cAI---------------4444413-1-9LKLNJLTMNNKLJLGLNN-----2---J5CBDGGGGGIJJQOCCCCCCCBBE2222--J-774256111111112-4-------------------------11111-1------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------4---------8-----------1--7-----4---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 507 STR:RPRED 86.8 SQ:SECSTR #########################################################################cEEEEEccHHHHHHHHHTcGGGTT####ccEEEEEcTTcHHHHHHHHHTTccEEEEccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHEEEccccHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEcccGGGGEEEcccccccccHHHHHHcTTTHHHHHHHHTTTGGGEEEEHHHHccEEEEEcccHHHHHHHTccccEEEEEEcccccHHHHHHHHHHHHHHHTTcccEEEEcccccHHccGGGHHHHcHHHHHHTTTTEEEEEEEEEEcccccEEEEEEEEEEEETTEEEEcHHHHccccccHHHHHHHHHHHHHHHHHHHTTccTTcccEcEEEEccHHHHGGTTHHHHHHHHHHHHTTccGGGEEEEEccTTcccccHHHHHHHHHHHTTTcEEEEEEETTTcccHHHHHHHcccEEEEEcTTHHHHTcccHHHHHHHHHHHHHHHHTcEEEEEccccHHHHHHHHHTTEEEEccTTTcccccccccTTTTHHHH DISOP:02AL 1-4, 21-28| PSIPRED ccccccEEEEEEcccccccccccccccccccHHHHEEEEEEEcccccEEEEcccccccEEEcccHHHHccccccEEEccHHHHHHHHHHHHccccccccEEEEEEEEEcccHHHHHHHcccEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccHHHHHccHHHHHHHHHHHHHHHHHHcccccEEEEEEccEEEEEEcccccHHHHHHHHHHHHHHHHccEEEccEEEEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHccEEEcccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEcccccEEEEEEEEEEEccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccHHHHccHHHHHHHHHHHHHcccccccEEEEEEHHHHHccHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHccccEEEEcHHHHccccccHHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHccccEEcHHHccccccHHHHHHHHHHcc //