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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57859.1
DDBJ      :             solute/sodium symporter
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  217/915 : Eukaryota  72/199 : Viruses  0/175   --->[See Alignment]
:344 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   40->177 PF01758 * SBF 1e-11 34.8 %
:HMM:PFM   39->214 PF01758 * SBF 1.5e-44 35.8 176/187  
:BLT:SWISS 12->300 YOCS_BACSU 3e-52 41.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57859.1 GT:GENE ABA57859.1 GT:PRODUCT solute/sodium symporter GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(1512219..1513253) GB:FROM 1512219 GB:TO 1513253 GB:DIRECTION - GB:PRODUCT solute/sodium symporter GB:PROTEIN_ID ABA57859.1 GB:DB_XREF GI:76883178 InterPro:IPR002657 LENGTH 344 SQ:AASEQ MATTANRITALFPLLALMGAGVAYQYPEPWVVLKPAIVPLLGVIMFGMGITLKANDFVLILKQPQAVATGALLQFLLMPFIAWIVSHLFSLPAYLTVGMILLGCSPGGTASNVVCYLARGDVALSITLTAASTLLSVLATPFLTWLYVGQQVPVPVADMLQSILIIVLLPVTLGVIINTFFGQRLGKLTDVFPVISVFAIVLIVAIIVAINQDKLTLIAPTIALCILLHNGLGLASGYGLAQTLGFSQRQSRTVAIEVGMQNSGLAVALALKYFTAQAALPGALFSIWHNLSGSLLAYYWSHRSQDSPGERLKADAHPVWKKASTSLISWLWAMLGRLFRNKRP GT:EXON 1|1-344:0| BL:SWS:NREP 1 BL:SWS:REP 12->300|YOCS_BACSU|3e-52|41.2|289/321| TM:NTM 10 TM:REGION 6->28| TM:REGION 30->52| TM:REGION 66->88| TM:REGION 93->115| TM:REGION 123->145| TM:REGION 155->177| TM:REGION 187->209| TM:REGION 215->237| TM:REGION 258->280| TM:REGION 315->337| SEG 122->140|valsitltaastllsvlat| SEG 194->210|visvfaivlivaiivai| RP:PFM:NREP 1 RP:PFM:REP 40->177|PF01758|1e-11|34.8|138/182|SBF| HM:PFM:NREP 1 HM:PFM:REP 39->214|PF01758|1.5e-44|35.8|176/187|SBF| GO:PFM:NREP 3 GO:PFM GO:0006814|"GO:sodium ion transport"|PF01758|IPR002657| GO:PFM GO:0008508|"GO:bile acid:sodium symporter activity"|PF01758|IPR002657| GO:PFM GO:0016020|"GO:membrane"|PF01758|IPR002657| OP:NHOMO 495 OP:NHOMOORG 299 OP:PATTERN ------------------------1---1---------11111-------111--------------- -----1112221-1-----------------------2------1-1-----111111--111--1--1--1---111--1--1----------------1----1-2-1---------------11---1--------1-------1-------2211111--11-11------------------------111111-11-111-1111111111-1-1-1-----------111-1111111111----1---------------------1------------11---------------------------11------------------------1------1---1-----------1-------------------------------111-11111111--------------22-------------111-----1-1--------11111--------------------------------1------11--------1------1---------1------------------------------112212--1----1----1-1-1-----------------1-----1------------------1--------121------1111-2-1111-1--1-----1---------11---11------------------------------111-------------111-1--11----------------------------------11-111112-2------11-1112111-11--1111211121211-111-1111--112-------------------------------1331133-----------------------------------------------1- ------------------------------------------------------------------------------------------------------------1-9-242242221122332339A5-34423322124-231212123211147A6-311---------3221O121235575-6423----3 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 302-319, 342-344| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc //