[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57872.1
DDBJ      :             isocitrate dehydrogenase (NADP)
Swiss-Prot:             

Homologs  Archaea  60/68 : Bacteria  759/915 : Eukaryota  188/199 : Viruses  0/175   --->[See Alignment]
c.77.1
:422 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->418 3dmsA PDBj e-174 70.6 %
:RPS:PDB   5->418 1cw7A PDBj e-129 67.6 %
:RPS:SCOP  5->418 1ai2A  c.77.1.1 * e-127 67.8 %
:HMM:SCOP  2->418 1pb1A_ c.77.1.1 * 7.7e-140 39.9 %
:RPS:PFM   30->414 PF00180 * Iso_dh 4e-77 51.6 %
:HMM:PFM   31->414 PF00180 * Iso_dh 9.7e-110 37.9 338/347  
:BLT:SWISS 1->419 IDH_COXBU e-177 69.4 %
:PROS 305->324|PS00470|IDH_IMDH

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57872.1 GT:GENE ABA57872.1 GT:PRODUCT isocitrate dehydrogenase (NADP) GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1526773..1528041 GB:FROM 1526773 GB:TO 1528041 GB:DIRECTION + GB:PRODUCT isocitrate dehydrogenase (NADP) GB:PROTEIN_ID ABA57872.1 GB:DB_XREF GI:76883191 InterPro:IPR001804 InterPro:IPR004439 LENGTH 422 SQ:AASEQ MAYDKISLPSDGQPITVKEDFSLEVPARPIIPFIEGDGIGVDITPVMRQVVDKAVAVAYRGERSLAWTEVYAGEKATRIYGADEWLPAETLDALRQFVVSIKGPLTTPVGKGIRSLNVTIRQVLDLYACIRPIRYFPGTPSPLADPSRTHMVVFRENTEDIYAGIEWPAQSPETKKVIGFLRQEMDVEKIRFPESSGIGIKPVSQEGSQRLIRKALQYAIDNDRRSVTLVHKGNIMKFTEGAFRDWGYTLAQEAFGARPIDGGPWCEFASPESGEKIIVKDAIADNFLQQILLRPEEYDVIATLNLNGDYISDALAAQVGGIGMAPGANMGDRVAVFEATHGTAPKYAGQDRVNPSSIILSGEMMLRHLGWNEAADLIIQGISDALATKTVTYDLARLMEGATQVSCSGFGTAIMKHMVDPA GT:EXON 1|1-422:0| BL:SWS:NREP 1 BL:SWS:REP 1->419|IDH_COXBU|e-177|69.4|418/427| PROS 305->324|PS00470|IDH_IMDH|PDOC00389| BL:PDB:NREP 1 BL:PDB:REP 3->418|3dmsA|e-174|70.6|412/413| RP:PDB:NREP 1 RP:PDB:REP 5->418|1cw7A|e-129|67.6|413/415| RP:PFM:NREP 1 RP:PFM:REP 30->414|PF00180|4e-77|51.6|335/338|Iso_dh| HM:PFM:NREP 1 HM:PFM:REP 31->414|PF00180|9.7e-110|37.9|338/347|Iso_dh| GO:PFM:NREP 4 GO:PFM GO:0000287|"GO:magnesium ion binding"|PF00180|IPR001804| GO:PFM GO:0016616|"GO:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"|PF00180|IPR001804| GO:PFM GO:0051287|"GO:NAD or NADH binding"|PF00180|IPR001804| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00180|IPR001804| RP:SCP:NREP 1 RP:SCP:REP 5->418|1ai2A|e-127|67.8|413/414|c.77.1.1| HM:SCP:REP 2->418|1pb1A_|7.7e-140|39.9|416/0|c.77.1.1|1/1|Isocitrate/Isopropylmalate dehydrogenase-like| OP:NHOMO 2275 OP:NHOMOORG 1007 OP:PATTERN 11-2--2222222222-2222222211222222222222222222222323332221-1--3112-22 4443111-11111121111-1111-3111111133322431--1211-1111121111--111-1331-111111111-22-322121222212---11--2-1121131--------------111111111121333332224322222222222222222122222322222222222223332211132322222222322222243333322232433112222222212222222222222222222-------2------------11-221-------222-1111111111-------------222222222-22-21111111111122111---2-11-31122--11222-221112--3222111--1--1117441132122111111111111-22322423222-2222225324221111-31241342112222222243322121111111111111111111111111111111131123543445554433333554533331333745531222553444444774333222212111111122223312321222222222-1111111222222341311111------1111111111211122332221312312222222222222222222---2522-11--122331123222332233-2323322333223333332333222323222222222222223333322131-133333333333111111111222224232111113-111-2112333331212111222233232232223331-1--1---111121111111111222222222222222211112222-------------------------------------22--1-1111-2 ----225-21--3334544555355543323333433333233333334465463343333332333323323332323333333313-343533343433-4556-3134573333313225333131DZ6-5451323723541232231164313436324333A3754463333191112374874931121111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 420 STR:RPRED 99.5 SQ:SECSTR cccccccccccccccEEETTcEEEcccccEEEEEcccTTHHHHHHHHHHHHHHHHHHHTTTccccEEEEcccTHHHHHHHcTTccccHHHHHHHHHHcEEEEcccccccccccccHHHHHHHHTTccEEEEEEEccTTcccccccGGGcEEEEEEEccccGGGccEEcTTcHHHHHHHHHHHHTcccccccccTTccEEcccccHHHHHHHHHHHHHHHHHTTccEEEEEEcTTTcTTTHHHHHHHHHHHHHHHHccEEcTTcccEEEEcTTTccEEEEEEEEHHHHHHHHHHcGGGccEEEEcHHHHHHHHHHHHHHTTcTTTcccEEEccccEEEEccccccTTTTTccccccHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHTTEEEHHHHTTccccEEEcHHHHHHHHHHTcHT## DISOP:02AL 1-3, 8-19| PSIPRED cccccccccccccEEEEEccccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEcHHHHHHccccccccHHHHHHHHHccEEEEcccccccccccccHHHHHHHHHccEEEEEEEEEcccccccccccccccEEEEEEccccEEcccccEEccccccEEcccccccccEEEEEcccccEEEEEEccHHHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHccHHHHHHHHHHHHHHHHHHHccccHHHHHccccccccEEEHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHccHHHccccEEcccEEEEEccccccHHHcccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccHHHHHHccccccccHHHHHHHHHHHHHHcc //