[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57885.1
DDBJ      :             Patatin
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  120/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.19.1
:379 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  9->232 1oxwA  c.19.1.3 * 2e-21 13.3 %
:HMM:SCOP  4->369 1oxwA_ c.19.1.3 * 6.8e-41 27.8 %
:RPS:PFM   10->221 PF01734 * Patatin 4e-14 40.1 %
:HMM:PFM   10->224 PF01734 * Patatin 3.2e-25 29.4 194/204  
:BLT:SWISS 1->57 PLPL_MAGGR 5e-04 38.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57885.1 GT:GENE ABA57885.1 GT:PRODUCT Patatin GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1542184..1543323 GB:FROM 1542184 GB:TO 1543323 GB:DIRECTION + GB:PRODUCT Patatin GB:PROTEIN_ID ABA57885.1 GB:DB_XREF GI:76883204 InterPro:IPR002641 LENGTH 379 SQ:AASEQ MNSNEGDLALVMSGGGARAAYQIGFLNCLAQLYPELKIPILTGVSAGAINAAYLANQPGTFSERVEGLTKIWAGLATEQMFRVDSFSIVSNVVRWSLRLLLGGASHTIKVRSLLDTSPLEVLLEQVFDLNDGYLTGIQRNLGGGELKAIAITTSNYSTGQSVSWVQGRELRRWERAHRKGIQCALKRKHILASVSLPFFFPAVEIGGYWHGDGGIRMTAPLSPAIHLGASRILAISTHYAPNYEEDNYPNIDHYPPPIQVAGSLFDAIFLDVFDNDALRLERINRLVARLPERQRYGLRPVKLLLSRPSQDLGKLANEYESTLPRSFRFMTRGLGTQETRSNDVLSLLMFQPDYLERLMELGRQDAQQRSNEIREFLER GT:EXON 1|1-379:0| BL:SWS:NREP 1 BL:SWS:REP 1->57|PLPL_MAGGR|5e-04|38.2|55/787| RP:PFM:NREP 1 RP:PFM:REP 10->221|PF01734|4e-14|40.1|177/182|Patatin| HM:PFM:NREP 1 HM:PFM:REP 10->224|PF01734|3.2e-25|29.4|194/204|Patatin| GO:PFM:NREP 1 GO:PFM GO:0006629|"GO:lipid metabolic process"|PF01734|IPR002641| RP:SCP:NREP 1 RP:SCP:REP 9->232|1oxwA|2e-21|13.3|195/360|c.19.1.3| HM:SCP:REP 4->369|1oxwA_|6.8e-41|27.8|302/0|c.19.1.3|1/1|FabD/lysophospholipase-like| OP:NHOMO 131 OP:NHOMOORG 120 OP:PATTERN -------------------------------------------------------------------- --------------------------------------1--------------------------------------------------------------------11-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-11111111-11111--1111111111212--111111-11-1111112----1--------1111112-----------------------2212-4-----------------------------11---11-11-1111121111111111111---11----------------------------------------------------------------------------------------------1-----1111-11-1--------------------------111111111111111111-------------1----------------------------111111------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4, 293-296| PSIPRED cccccccEEEEEccHHHHHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHcccccHHHHHHHHHHHHHHHcHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHHHcccccEEEEEEEEcccccEEEEEcccccccccHHccccccHHHHHHHHHHHHccccccccEEEccEEEEccEEEccccHHHHHHccccEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHc //