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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57889.1
DDBJ      :             DegP2 peptidase. Serine peptidase. MEROPS family S01B
Swiss-Prot:             

Homologs  Archaea  29/68 : Bacteria  869/915 : Eukaryota  89/199 : Viruses  0/175   --->[See Alignment]
b.36.1b.47.1
:372 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   57->368 2zleA PDBj 7e-48 42.3 %
:RPS:PDB   96->253 3ee1A PDBj 1e-34 11.9 %
:RPS:PDB   238->372 2db5A PDBj 9e-16 18.5 %
:RPS:SCOP  94->252 2bhgA1  b.47.1.4 * 7e-32 14.9 %
:RPS:SCOP  236->361 1nf3C  b.36.1.1 * 4e-15 17.2 %
:HMM:SCOP  53->268 1sotA2 b.47.1.1 * 4.7e-62 45.2 %
:HMM:SCOP  229->361 1ry4A_ b.36.1.1 * 3e-18 33.3 %
:RPS:PFM   105->246 PF00089 * Trypsin 2e-04 35.2 %
:HMM:PFM   95->257 PF00089 * Trypsin 4.2e-18 24.8 161/219  
:BLT:SWISS 55->368 DEGP1_ARATH 1e-93 53.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57889.1 GT:GENE ABA57889.1 GT:PRODUCT DegP2 peptidase. Serine peptidase. MEROPS family S01B GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1546799..1547917 GB:FROM 1546799 GB:TO 1547917 GB:DIRECTION + GB:PRODUCT DegP2 peptidase. Serine peptidase. MEROPS family S01B GB:PROTEIN_ID ABA57889.1 GB:DB_XREF GI:76883208 InterPro:IPR001254 InterPro:IPR001478 InterPro:IPR001940 LENGTH 372 SQ:AASEQ MLKRKKISIGSLALLLVLAFTVGIGWQGFAERFLEAPPPAEPRPVLARGDLAAVEKSTIELFRKVSPAVVFITTLSRHRDWFSLNVQEIPRGTGSGFIWDDSGHIVTNLHVVQGSNAAKVTLYDHSTWDAKLIGAAPEKDLAVLRIKAPRNKLMPIAIGSSGDLQVGQKAFAIGNPFGLDQTLTTGVISALGREMESAARIPIRNVIQTDAAINPGNSGGPLLDSAGRLMGVNTAIYSPSGTYAGIGFAIPVDTVNWVVPELIAKGRVERPTLGIELLPARAMANMRVEGAVILRVIPGSGAEQAGLRGVQRDSLGRIYLGDIIVAVEGQPVLDADDLVLALERRQAGEKIQVQVIREEQRLDIEVTLGSPA GT:EXON 1|1-372:0| BL:SWS:NREP 1 BL:SWS:REP 55->368|DEGP1_ARATH|1e-93|53.2|314/439| TM:NTM 1 TM:REGION 8->29| SEG 332->342|vldaddlvlal| BL:PDB:NREP 1 BL:PDB:REP 57->368|2zleA|7e-48|42.3|284/396| RP:PDB:NREP 2 RP:PDB:REP 96->253|3ee1A|1e-34|11.9|135/336| RP:PDB:REP 238->372|2db5A|9e-16|18.5|124/128| RP:PFM:NREP 1 RP:PFM:REP 105->246|PF00089|2e-04|35.2|142/217|Trypsin| HM:PFM:NREP 1 HM:PFM:REP 95->257|PF00089|4.2e-18|24.8|161/219|Trypsin| GO:PFM:NREP 2 GO:PFM GO:0004252|"GO:serine-type endopeptidase activity"|PF00089|IPR001254| GO:PFM GO:0006508|"GO:proteolysis"|PF00089|IPR001254| RP:SCP:NREP 2 RP:SCP:REP 94->252|2bhgA1|7e-32|14.9|148/194|b.47.1.4| RP:SCP:REP 236->361|1nf3C|4e-15|17.2|116/123|b.36.1.1| HM:SCP:REP 53->268|1sotA2|4.7e-62|45.2|210/213|b.47.1.1|1/1|Trypsin-like serine proteases| HM:SCP:REP 229->361|1ry4A_|3e-18|33.3|120/128|b.36.1.1|1/1|PDZ domain-like| OP:NHOMO 2541 OP:NHOMOORG 987 OP:PATTERN --1----1111111111111111-111112-1--1-----------1-----------------1-13 2372611211111134433-32443333333334442353244433113331445211114522325344211111111111512222112112111--1111124212211111111111111121111112131333554444463573342233333433233554753322223322237533322-423222222222222222223333223122432211111146222222222222222222221111111111111111111122211111111111111111111111111111111111111111111111211311111111111423322222231141121222322223322221-222C333733333649887436455333333333333-55555654363153336766553443333312443322333333333233338331111111111111111111111111111123122122222444544334445545444444554444322544533423443422342422221111111223363221121232532221232342242554586351111111111111111111121121332222244232222222222222222222221-1323411-11133332333333333333-3333333333333333333333332223333333333333333333332333133333333333311322222222225342212222222221222222222222223322222222222222222---------12222222222222222222222222222--413344441112122233--------------------------1111111111453 ----11--1---111---------------------------------------------------------------------------------------------9-25544W243-3454752749J4-33A1322554331422242164544311111--11121--215855t444758556-673521117 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 322 STR:RPRED 86.6 SQ:SECSTR #####################################ccccHH#########HcccccccccccHHHHHHHHHHcccccccccEcEEEEEccccEccccHHHHHHHHHHHHHTTcHHHHHHHHHTTcTTTTcccHHHHHHHHHHHHHHTEccEEHHHHHHccccccEEEEEEEEccccEcEEEEEEEccEEEccccEEEEEEEEEEEEEEEEEcccccccHHEcTTccEEHHHHHccGGGTEEcEEEEEEEEcHHHHHHTTEEEEcTTccEEEEccEHHHHHHHHTTccccEEccEEETTEEEEEEEcTcT####ccccTTccEEEEcccccccGGGTTcccccccTTccccEEEEETTEEEEEEEEEcccc DISOP:02AL 1-4, 34-51, 82-88, 371-372| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHcccEEEEEEEEEEcccccccccccccEEEEEEEEccccEEEEEHHHcccccEEEEEEcccEEEEEEEEEEcccccEEEEEEEcccccEEEEEEccccccccccEEEEEEEccccccEEEEEEEEEccccccccccccccEEEEEcccccccccccEEEccccEEEEEEEEEEEccccccccEEEEEHHHHHHHHHHHHcccccccccccEEEEEHHHHcccccccEEEEEEcccccEEEEcccccccccccccccccEEEEEccEEcccHHHHHHHHHHcccccEEEEEEEEccEEEEEEEEEEccc //