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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57894.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  91/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
:430 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   5->421 PF11902 * DUF3422 e-102 50.5 %
:HMM:PFM   6->423 PF11902 * DUF3422 9.5e-163 48.9 417/420  
:BLT:SWISS 15->112 COG6_CAEEL 3e-04 28.1 %
:BLT:SWISS 105->219 XRN2_CHAGB 1e-04 27.0 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57894.1 GT:GENE ABA57894.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(1556755..1558047) GB:FROM 1556755 GB:TO 1558047 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID ABA57894.1 GB:DB_XREF GI:76883213 LENGTH 430 SQ:AASEQ MTIPVDHPQRLLLNHELHARLPESLAPPEQISHLVLSSDAEMVQQEREKLTEICIRFGHPIPTSKDNHLRIDLGPFRLQWEKHTEFTSYTFFRRGPFQEPFANTVIESIPQDWLAELPGQVLVAAHLAIYPLPEKPRNPDELAAALFEGNAVTGARIGEGAGIAYADFRLHKDGFSRFIIKDISLTPRQAGRAVQRLLEIESYLIQALRTYPLARRTMPMLGHAEQELAQITEAIASATTEEESELLDQLTKLAASTESLASSIQYRITAAQAYYELVQRRINELRELRVEGMQTFREFCERRMGPAMHTCETVLRLQENLSRRIGRASELLRTRVNISLEHQNQQVLSSMAERAKLQLHLQETVEGLSVAAITYYVVGLVGYLARAAEAAGLPINPDLTIGISIPVVALSVALSVRKIRRMVSRNHDVD GT:EXON 1|1-430:0| BL:SWS:NREP 2 BL:SWS:REP 15->112|COG6_CAEEL|3e-04|28.1|96/100| BL:SWS:REP 105->219|XRN2_CHAGB|1e-04|27.0|115/1039| COIL:NAA 51 COIL:NSEG 1 COIL:REGION 238->288| TM:NTM 2 TM:REGION 368->390| TM:REGION 395->416| SEG 231->245|iteaiasatteeese| RP:PFM:NREP 1 RP:PFM:REP 5->421|PF11902|e-102|50.5|416/420|DUF3422| HM:PFM:NREP 1 HM:PFM:REP 6->423|PF11902|9.5e-163|48.9|417/420|DUF3422| OP:NHOMO 108 OP:NHOMOORG 96 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-----1111111111111----------1---1--1--11--211-1112211111---1111111111-------------111--------------------------------11------111111-----2211------12-121-1----11---1111-11-1-----1-------11-111---------------------------------------------------------------1-3-1--------------------1---111-------------------------------------------------------------------------------------------------------1---1-------------------------------2------1------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------2---------------------------------------------------------------------1-21------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 132-144, 237-239, 424-430| PSIPRED cccccccHHHHHHHHHHcccccccHHHHHHHHHHHEEccccHHHHHHHHHHHHHHHcccccccccccEEEEEcccEEEEEEEEEEEEEEEEEEcccccccccccHHHccccHHHcccccHHEEEEEEEEEccccccccHHHHHHHHHccccEEEEEEEcccEEEEEEEEEccccEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //