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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57945.1
DDBJ      :             40-residue YVTN beta-propeller repeat
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  103/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
b.69.2
:383 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   46->340 1l0qA PDBj 3e-26 34.5 %
:RPS:PDB   101->183 3ba7A PDBj 5e-05 12.0 %
:RPS:PDB   282->335 1c9iA PDBj 6e-05 9.4 %
:RPS:SCOP  44->345 1jmxB  b.69.2.2 * 3e-21 20.1 %
:HMM:SCOP  5->382 1mdaH_ b.69.2.1 * 8e-53 30.4 %
:RPS:PFM   66->350 PF10282 * Muc_lac_enz 7e-12 29.7 %
:HMM:PFM   66->319 PF10282 * Muc_lac_enz 2.1e-12 25.2 238/345  
:HMM:PFM   329->354 PF10282 * Muc_lac_enz 0.00064 50.0 26/345  
:BLT:SWISS 69->334 VGB_MYCS2 4e-07 26.4 %
:REPEAT 3|43->84|85->128|291->334
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57945.1 GT:GENE ABA57945.1 GT:PRODUCT 40-residue YVTN beta-propeller repeat GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1612979..1614130 GB:FROM 1612979 GB:TO 1614130 GB:DIRECTION + GB:PRODUCT 40-residue YVTN beta-propeller repeat GB:PROTEIN_ID ABA57945.1 GB:DB_XREF GI:76883264 InterPro:IPR011964 LENGTH 383 SQ:AASEQ MKKIDGFMVALLAGGAGLMLSATDSVLAAESSGSGQDNQGLQAKLYVTLEEPDALGIVDPKSKKGLGTVAVGGKPHDVICAPDGATAYVTNPETHNLSVVDTATDKVKKTVEFGQGTTPWHVEISPDGSQVFAALQDQSAVAIIATADNHLATKVSVTSGPWGVAAPKNGPWAVAAPRNDVVYVTLNGSITKGTANAARSEDIAVFDPTAAVPTVKYVTLAADTANGPHGIVSAPDGSAVYVAAEASHEVWKIQVDGNQAKRVVEIPDPNPAGTPLNPGFPTDLGISPDGNTLIAVNHDLDSITVINLKTHKIIETVSTGEGSAPWGALISPDGQTAYISTNGADSLAFFSMKELTDGTEGARKHTIADLPTSDGLAWCNLAQ GT:EXON 1|1-383:0| BL:SWS:NREP 1 BL:SWS:REP 69->334|VGB_MYCS2|4e-07|26.4|250/282| NREPEAT 1 REPEAT 3|43->84|85->128|291->334| SEG 10->18|allaggagl| BL:PDB:NREP 1 BL:PDB:REP 46->340|1l0qA|3e-26|34.5|252/385| RP:PDB:NREP 2 RP:PDB:REP 101->183|3ba7A|5e-05|12.0|83/141| RP:PDB:REP 282->335|1c9iA|6e-05|9.4|53/355| RP:PFM:NREP 1 RP:PFM:REP 66->350|PF10282|7e-12|29.7|269/311|Muc_lac_enz| HM:PFM:NREP 2 HM:PFM:REP 66->319|PF10282|2.1e-12|25.2|238/345|Muc_lac_enz| HM:PFM:REP 329->354|PF10282|0.00064|50.0|26/345|Muc_lac_enz| RP:SCP:NREP 1 RP:SCP:REP 44->345|1jmxB|3e-21|20.1|283/339|b.69.2.2| HM:SCP:REP 5->382|1mdaH_|8e-53|30.4|339/0|b.69.2.1|1/1|YVTN repeat-like/Quinoprotein amine dehydrogenase| OP:NHOMO 194 OP:NHOMOORG 110 OP:PATTERN ------------------------------1------------------1A8B--------------- 124-2------------11-11----11111-1111--12-1-1-------1----------11--11---------------------------------------1----------------------------------------------------------1---------------------------------1-1------------2---21---------------------------------------------------------------------------------------------------------1-----------1-----------------1----------------2-----1------3-11-------1----------1-532462451-------------1--3-----11-11---------------2-----------------------------------1---1-----------------2----------21-----12--22-22-21----211----------1--11----------------1----3---------1---------------------------------1-1--------------------1---1---------------------------------------------------------------------------------------------------------2-----------------------------------11-11222111-1--------------------------11111----------------------------------------------------------------2- ------------------------------------------------------------------------------------------------------------3-------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 328 STR:RPRED 85.6 SQ:SECSTR ###########################################EEEEEETTTTEEEHHHTccccccTTTcccccccHHHHHHHHHHHHccccccccccHHccccccccccEEEEETTTTEEEEEcTTccEEEEccTTcTTccEEEEEEETTEEEEEETTTccEEEEcTTccEEEEccccGGGcHHHHccTTTcccHHHHccccHHHHHHHHcEEEEEEHHccccccccccHHHHHHHcEEcccGGGccccccccccGGGEEEEEETTTccEEEEEEccccEEEEEEETTTTEEEEEETTTcEEEEEEEcTTTHHHHHHTTTccHHHHHHHHHHHTEEEEEEETEEEEEEEcccccccEEEEccccEEcccE############ DISOP:02AL 383-384| PSIPRED cccEEEEEEEEccccEEEEEcccccEEEEEEccccccccccccEEEEEEccccEEEEEEccccEEEEEEEccccEEEEEEcccccEEEEEEccccEEEEEEcccccEEEEEEcccccccEEEEEcccccEEEEEEccccEEEEEEccccEEEEEEEccccEEEEEEcccccEEEEEccccEEEEEcccccEEEEEEccccccEEEEEccccEEEEEccccEEcccccEEEEEEcccccEEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEccccccEEEEEcccccEEEEEEccccEEEEEEcccccEEEEEEccccccEEEEEEcccccEEEEEEccccEEEEEEccccEEEcccccccEEEEEEcccEEEEEEEEc //