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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA57979.1
DDBJ      :             Peptidase M61
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  173/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.36.1c.1.8d.92.1
:604 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   4->445 2dq6A PDBj 2e-36 13.1 %
:RPS:PDB   490->570 3dj1B PDBj 8e-09 18.5 %
:RPS:SCOP  281->317 1e9lA1  c.1.8.5 * 3e-05 27.0 %
:RPS:SCOP  494->571 1y8tA1  b.36.1.4 * 5e-08 25.6 %
:HMM:SCOP  181->432 1hs6A3 d.92.1.13 * 4.8e-07 22.1 %
:HMM:SCOP  490->575 1sotA1 b.36.1.4 * 5.1e-11 25.6 %
:RPS:PFM   270->390 PF05299 * Peptidase_M61 1e-47 68.6 %
:HMM:PFM   270->389 PF05299 * Peptidase_M61 5.6e-44 45.0 120/122  
:HMM:PFM   491->542 PF00595 * PDZ 9.2e-08 28.8 52/81  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA57979.1 GT:GENE ABA57979.1 GT:PRODUCT Peptidase M61 GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1653266..1655080 GB:FROM 1653266 GB:TO 1655080 GB:DIRECTION + GB:PRODUCT Peptidase M61 GB:PROTEIN_ID ABA57979.1 GB:DB_XREF GI:76883298 InterPro:IPR001478 InterPro:IPR006025 InterPro:IPR007963 LENGTH 604 SQ:AASEQ MSFIHYRIIPKNPQAHLFQVTLTILEPAPEGQCLSLPAWIPGSYLIRDFAKHVVQLRAESQGHPLPVEKLSKSLWQCAPSGGPVTINYEVYAWDSSVRAAHLDTFHGFFNGTSVFLRVEGQAHEPCTVTLLPPEGETYRHWRVATALPRAGAEPYGFGDYQAGDYEELVDHPVEMGEFSLVTFEACGVPHDIAITGRHRADMERLSRDLKILCEHHIRFFGEPAPMDRYVFLVTAVGEGYGGLEHRASCALLCNRSDLPQAGETEVGEGYRNFLGLCSHEYFHTWNIKRIKPAAFVPYDLQQENYTRLLWAFEGITSYYDDLGLVRSGLISQESYLELLGQTITRVLRGSGRLKQNLAESSFDAWTKFYQQDENAPNAIVSYYTKGALVALALDLTLRWETHGECSLDGVMRALWESYGKTGVGVPEDGVERQVAEVSGLDITDFFEVALRRAEDLPLQALLAQVGICYALRVPESSDDKGGKPGKGGTPRARLGIRLVPNEKEARISQVFDESAAQWAGLSAGDSLIAVDGIRVTASNLEKVISSYPGGARVIIHAFRRDELREFEAALQLPPKDTCVLTIDEDASPTAVVAREAWLLEFRHD GT:EXON 1|1-604:0| SEG 480->488|kggkpgkgg| RP:PDB:NREP 2 RP:PDB:REP 4->445|2dq6A|2e-36|13.1|398/865| RP:PDB:REP 490->570|3dj1B|8e-09|18.5|81/110| RP:PFM:NREP 1 RP:PFM:REP 270->390|PF05299|1e-47|68.6|121/121|Peptidase_M61| HM:PFM:NREP 2 HM:PFM:REP 270->389|PF05299|5.6e-44|45.0|120/122|Peptidase_M61| HM:PFM:REP 491->542|PF00595|9.2e-08|28.8|52/81|PDZ| RP:SCP:NREP 2 RP:SCP:REP 281->317|1e9lA1|3e-05|27.0|37/302|c.1.8.5| RP:SCP:REP 494->571|1y8tA1|5e-08|25.6|78/88|b.36.1.4| HM:SCP:REP 181->432|1hs6A3|4.8e-07|22.1|222/252|d.92.1.13|1/1|Metalloproteases ("zincins"), catalytic domain| HM:SCP:REP 490->575|1sotA1|5.1e-11|25.6|86/99|b.36.1.4|1/1|PDZ domain-like| OP:NHOMO 209 OP:NHOMOORG 183 OP:PATTERN ------1111111111---------------------------------------------------- -21--------------------------------------------------------------------------------------------------1121-13-1------------------------3-11111---1-1111111111111111111111111-1-----1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2221------------------------------------------------------------------------------111-----------------------------------12111111111111111111111111111111111111111111111111111111-1-1111111111---11-------------------------22121----------------------------11---1--1211-2222222122221111211---1-----------------------------------------------------------------------------------------------1----------1------------------1111111111----------------------------1-----------------1-11-----------111111------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 574 STR:RPRED 95.0 SQ:SECSTR ###EEEEEEEEccccEEEEEEEEEETTcGGGcccEEEcccTTccEEEEcccccEEEEEEETTEEcccEEEETTEEEEcccccEEEEEEcGGGcccccEETTEEEEEcTTTTGGGTccccccTTccEEEEEEEEEETTTccEEEEccEEEEEEEEEccTTEEEEEEEEEEEEcGGGccEEEEccEEEEEEEEEEEcTTcGGGcHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEccccccEEccTTEEEEEEEGGGTcccTTTccHHHHHHHHHHHHHHHHTTTcTTTEEEccGGGGGccccccGGGHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHTHHHHHTcTTcccccccEEccGGGGccHHTTccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEEcHHHHHHHHHHHHHTcccTTTTccHHHcccccccccccccHHHHHHHHcccccccccEEEEEcccTEEEccEEEEEccccEEEEEEcTTcHHHHTTccTTcEEEEETTEEcTTccHHHHHHTcTTccEEEEEEEcGGGHHHHHHHTccccccc########################### DISOP:02AL 483-485, 580-588| PSIPRED cccEEEEEEEccccccEEEEEEEEEEcccccEEEEEEcccccccccHHHHHEEEEEEEEEccEEEEEEEcccccEEEcccccEEEEEEEEEEEcccccccEEcccEEEEEHHHHHccccccccccEEEEEEccccccccccEEEccccHHHccccccEEEEcccHHHHccccEEEccEEEEEEEEccccEEEEEEEccHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEcccccEEEEEcccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHccccEEcccccccccccccccccccEEEccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHcccccccccEEcHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccHHHHHHHHHHccccccHHHHHHccccEEEEEcccHHHHHHccccccccccccEEEEEEEcccEEEEEEEccccHHHHcccccccEEEEEccEEccHHHHHHHHHHcccccEEEEEEEEccEEEEEEEEEEccccccEEEEEEccccHHHHHHHHHHHHHHccc //