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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58008.1
DDBJ      :             GDP-mannose 4,6-dehydratase
Swiss-Prot:             

Homologs  Archaea  54/68 : Bacteria  706/915 : Eukaryota  141/199 : Viruses  3/175   --->[See Alignment]
c.2.1
:373 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->357 1db3A PDBj e-132 68.4 %
:RPS:PDB   2->357 1db3A PDBj 1e-46 67.8 %
:RPS:SCOP  1->348 1bxkA  c.2.1.2 * 2e-54 29.0 %
:HMM:SCOP  2->360 1db3A_ c.2.1.2 * 1.8e-85 33.1 %
:RPS:PFM   5->241 PF01370 * Epimerase 4e-25 37.6 %
:HMM:PFM   4->251 PF01370 * Epimerase 5.4e-71 38.6 233/238  
:HMM:PFM   269->314 PF00595 * PDZ 2.2e-05 28.3 46/81  
:BLT:SWISS 2->366 GM4D_SHIFL e-149 67.5 %
:PROS 143->171|PS00061|ADH_SHORT

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58008.1 GT:GENE ABA58008.1 GT:PRODUCT GDP-mannose 4,6-dehydratase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1687469..1688590 GB:FROM 1687469 GB:TO 1688590 GB:DIRECTION + GB:PRODUCT GDP-mannose 4,6-dehydratase GB:PROTEIN_ID ABA58008.1 GB:DB_XREF GI:76883327 InterPro:IPR001509 InterPro:IPR002198 InterPro:IPR006368 LENGTH 373 SQ:AASEQ MKKALITGVTGQDGVYLVEFLLKKGYEVHGIKRRASLFNTDRIDHLYQDPHESERRFILHYGDLTDATNLIRVIQEVQPDEIYNLAAQSHVAVSFETPEYTANADALGTLRLLEAIRILGLEEKVRFYQASTSELYGKVQSVPQNEQTPFYPRSPYAAAKLYAYWITVNYREAYGMYACNGILFNHESPVRGETFITRKITRGLVRITLGLQSCLHVGNLEARRDWGHARDYVKAQWLMLQQSTPDDYVIATGEQHSVREFIEQAAQVLGLSLDWQGQGEEEIAVVRAVAGQAMECGHIQPGDVLIRIDRRYFRPTEVEALLGDASKARRELGWAPQTAFDDLVREMVMEDLKYAKRDVLCRQEGYRTFDYYE GT:EXON 1|1-373:0| BL:SWS:NREP 1 BL:SWS:REP 2->366|GM4D_SHIFL|e-149|67.5|363/373| PROS 143->171|PS00061|ADH_SHORT|PDOC00060| BL:PDB:NREP 1 BL:PDB:REP 2->357|1db3A|e-132|68.4|332/335| RP:PDB:NREP 1 RP:PDB:REP 2->357|1db3A|1e-46|67.8|332/335| RP:PFM:NREP 1 RP:PFM:REP 5->241|PF01370|4e-25|37.6|218/232|Epimerase| HM:PFM:NREP 2 HM:PFM:REP 4->251|PF01370|5.4e-71|38.6|233/238|Epimerase| HM:PFM:REP 269->314|PF00595|2.2e-05|28.3|46/81|PDZ| GO:PFM:NREP 3 GO:PFM GO:0003824|"GO:catalytic activity"|PF01370|IPR001509| GO:PFM GO:0044237|"GO:cellular metabolic process"|PF01370|IPR001509| GO:PFM GO:0050662|"GO:coenzyme binding"|PF01370|IPR001509| RP:SCP:NREP 1 RP:SCP:REP 1->348|1bxkA|2e-54|29.0|310/341|c.2.1.2| HM:SCP:REP 2->360|1db3A_|1.8e-85|33.1|356/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 2134 OP:NHOMOORG 904 OP:PATTERN 11--1-1-2111111-11---122322313-1225-1313221343242553412232233--12--2 12531224334-1122344-42224355555211-1223525441-1-122121-1-211-13-231423-11111111111323742444515221--22243342552--------------12141242253267767---6455464561333332223233555441323213433252-211112-1311111233212122325--2211312-1212111211672111111111111111----5---22111-112--321---111--1111111111111111121-1111111111111111111111113--3222233342232-22212-3-5--21-113265321111-1-11--2461232-----226422312124321222233323-33643634-4413111363554333-222222434423-3333333342223544-----------------------------1112-11111245523444444225755552524722321224151123122332112322122-------131221211421753427535444443833123143331-1--1212211211111112-11355523-211-2-21122-221---------11---2213------222--223332332342-33332322223221232233221121-4254434333143441133133322-2-11233-3222----1111111114-123----111----1--1-1--1---1-31334213411422314552111-11113121111111----2222343322244441-41444455--------1-----------------------------2121--2-342 11--112-311-3431111-11--1------------1-11-----11-11213111121111------1-1--1--------------1211111---111-334-2835312222211122123131362-222121131132121112-111234325123121111416326-22I312-194691723254634 -----------------------2--------------------------------------------------------------------------------------------------------------------------------------------------11--- STR:NPRED 373 STR:RPRED 100.0 SQ:SECSTR ccEEEEETTTcHHHHHHHHHHHHTTcEEEEEccTTTccTTcHHHHHHHHHHHccccEEEcccccccHHHHHHHHHHHcccEEEEcccccTTTTTTccHHHHHHHHTHHHHHHHHHHHHTTcTTTcEEEEEEEGGGGTTcccccccTTcccccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEccEEcTTccTTcHHHHHHHHHHHHHTTccccEEEccTTcEEccEEHHHHHHHHHHTTcccccccEEEcccccEEHHHHHHHHHHTTTEEEEEEccGGGcEEEEEEEcccccTHHTccTTcEEEEEcGGGcccccccccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHTHHHHcTTTTEEEEEEc DISOP:02AL 367-373| PSIPRED ccEEEEEccccHHHHHHHHHHHHcccEEEEEEcccccccccHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccEEEEEEEEHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccHHHHHHHHHHHHHccccEEEEccccEEEccEEHHHHHHHHHHHHccccccEEEEcccccEEHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHcccccccccEEEEcccccccccHHHHHccHHHHHHHccccccccHHHHHHHHHHHHHHHHcccHHHHccccccccccc //