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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58033.1
DDBJ      :             SSU ribosomal protein S6P modification protein
Swiss-Prot:RIMK_NITOC   RecName: Full=Ribosomal protein S6 modification protein;

Homologs  Archaea  53/68 : Bacteria  309/915 : Eukaryota  44/199 : Viruses  0/175   --->[See Alignment]
c.30.1d.142.1
:301 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   73->285 1uc9B PDBj 6e-08 25.3 %
:RPS:PDB   3->286 1a9xA PDBj 1e-27 19.2 %
:RPS:SCOP  1->96 1glvA1  c.30.1.3 * 5e-15 19.8 %
:RPS:SCOP  99->287 1eyzA3  d.142.1.2 * 1e-18 10.1 %
:HMM:SCOP  98->291 1gsaA2 d.142.1.1 * 1e-51 42.4 %
:RPS:PFM   97->270 PF08443 * RimK 3e-60 66.9 %
:HMM:PFM   98->286 PF08443 * RimK 1.4e-71 51.3 189/190  
:BLT:SWISS 1->290 RIMK_NITOC e-161 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58033.1 GT:GENE ABA58033.1 GT:PRODUCT SSU ribosomal protein S6P modification protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(1719337..1720242) GB:FROM 1719337 GB:TO 1720242 GB:DIRECTION - GB:PRODUCT SSU ribosomal protein S6P modification protein GB:PROTEIN_ID ABA58033.1 GB:DB_XREF GI:76883352 InterPro:IPR003135 InterPro:IPR004666 LENGTH 301 SQ:AASEQ MKIAVLSRNAKLYSTRRLVEAAKTRGHEVRVLDVLRCYMNIASHRPSIHYKGEDLTGFDAVIPRIGASVTFYGTAVLRQFEMIGVYPLSESVAITRSRDKLRSLQLLARKGIGLPVTGFAHAPDEIDDLIKMVGGAPVVIKLLEGTQGIGVVLAENKKAAQSVIEAFMGLKTHILVQEFIKETAGSDIRCFIIGDKVVAAMKRQAPEGEFRSNLHRGGSASLVRITPEERSTAIRAAQTMGLNVAGVDILRSNHGPLVMEVNSSPGLEGIESATGKDVATKVIEFIEKNATRGRTRTRGKG GT:EXON 1|1-301:0| SW:ID RIMK_NITOC SW:DE RecName: Full=Ribosomal protein S6 modification protein; SW:GN Name=rimK; OrderedLocusNames=Noc_1549; SW:KW ATP-binding; Complete proteome; Magnesium; Manganese; Metal-binding;Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->290|RIMK_NITOC|e-161|100.0|290/301| GO:SWS:NREP 4 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| SEG 291->300|trgrtrtrgk| BL:PDB:NREP 1 BL:PDB:REP 73->285|1uc9B|6e-08|25.3|186/253| RP:PDB:NREP 1 RP:PDB:REP 3->286|1a9xA|1e-27|19.2|281/1058| RP:PFM:NREP 1 RP:PFM:REP 97->270|PF08443|3e-60|66.9|172/177|RimK| HM:PFM:NREP 1 HM:PFM:REP 98->286|PF08443|1.4e-71|51.3|189/190|RimK| RP:SCP:NREP 2 RP:SCP:REP 1->96|1glvA1|5e-15|19.8|96/122|c.30.1.3| RP:SCP:REP 99->287|1eyzA3|1e-18|10.1|188/204|d.142.1.2| HM:SCP:REP 98->291|1gsaA2|1e-51|42.4|184/192|d.142.1.1|1/1|Glutathione synthetase ATP-binding domain-like| OP:NHOMO 583 OP:NHOMOORG 406 OP:PATTERN 1112113322222233-444443-2--11243---22343423-111112212-121-1--2--1-22 ---1---1---------------------------------------2--------1------------1-------------------------------1112--1----------------------------11111---12-11-221----211-2-1---11111--1111-111111111----------------------------------1---------------------------------------------------------------------------------------------------------------------------1----------------------------2------1--111-11------111111111111-11111111-11--11--111-1-11111121-1-11121--------1---1111------------------------------21-1--------------------2--------1----------1---1----1---1111---111111--------2-111---2-----------1-333321--1-------------------1----1122-211-12123333332233333321312---2112------1111-1-1111111111-111111111111111111111111---1111111111111111111111111----------------111111111111212111-11111111111----------11111112211111111221--------3111211111111221121111111-111--1-------------------------------------------------------- ---------------1---------------------------------------------------------------------------------------------2-2-1112-1211213413-47213242-1-41332232-12-1211112-----------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 287 STR:RPRED 95.3 SQ:SECSTR EEccTTccTHHHHHHHHHHHHHHHHTcEEEEEccGccEEEcccccHHHHHHHHHHHcccEEEccccHHHHHHHHHHTTHHHHHTcEEccccHHHHHHHcHHHHHHHHHHTTcccccEEEEccHHHHHHHHHHHccccEEEEETTccTTTTcEEEccHHHHHHHHHHHHHcTTcEEEEEccEEEEEEEEEcTTccEEEEEEEEEcccTTcGccGGGccEEEccccccHHHHHHHHHHHHHHTcccEEEEEcTTTccEEEEEEEccccHHHHHHHHcccHHHHHHHHHH############## DISOP:02AL 293-301| PSIPRED cEEEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHccccccEEEEcccccccccEEEEEcccccHHHHHHHHHHHHHccccEEccHHHHHHHccHHHHHHHHHHccccccccEEEccHHHHHHHHHHHccccEEEEEccccccEEEEEEccHHHHHHHHHHHHHccccEEEEEEcccccccEEEEEEEccEEEEEEEEEcccccEEEEcccccccccccccHHHHHHHHHHHHHHcccEEEEEEEEccccEEEEEEcccccHHHHHHHHcccHHHHHHHHHHHHHHcccccccccc //