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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58039.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  148/915 : Eukaryota  14/199 : Viruses  0/175   --->[See Alignment]
d.157.1
:337 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   48->335 2cbnA PDBj 4e-12 30.7 %
:RPS:PDB   28->337 2cbnA PDBj 2e-11 23.6 %
:RPS:SCOP  21->337 1y44A1  d.157.1.7 * 8e-29 28.1 %
:HMM:SCOP  27->336 1y44A1 d.157.1.7 * 1.9e-42 29.5 %
:HMM:PFM   39->70 PF00753 * Lactamase_B 3e-06 31.2 32/194  
:HMM:PFM   259->318 PF05368 * NmrA 8.1e-05 30.2 53/233  
:HMM:PFM   198->212 PF02197 * RIIa 0.00037 46.7 15/38  
:HMM:PFM   313->324 PF05972 * APC_15aa 0.00038 41.7 12/16  
:BLT:SWISS 5->322 RNZ_DEIRA 8e-25 29.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58039.1 GT:GENE ABA58039.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(1730252..1731265) GB:FROM 1730252 GB:TO 1731265 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID ABA58039.1 GB:DB_XREF GI:76883358 LENGTH 337 SQ:AASEQ MTKPLLQPLVVNDPFDDPVLYLDFLFQKRALLFDLGDIRALPPRKILRISDIFISHTHMDHFADFDWLLRLVLRREKKIRLFGPPGFIDQLEHKLKAYSWNLVHNYDNNLAFIATELHPNAASRQALFRCQRAFSQEHQENNSDLSPGVLIAEPAFRVRTAILDHGIPCLGFTIEESQHINIWKNRLQALSLPVGPWLHDLKRAILTQQPDDTPIRIWRQENGKKYQKYLPLGLLKRQISRTSPGQKISYIVDIRYSRSNCQKIVELIQGSHLLFIETTFLHKDAEMAAEKQHLTARQAGWIAREAGVKKLVPINFSPRYSDRRQTLVTEAQEAFKN GT:EXON 1|1-337:0| BL:SWS:NREP 1 BL:SWS:REP 5->322|RNZ_DEIRA|8e-25|29.4|299/331| BL:PDB:NREP 1 BL:PDB:REP 48->335|2cbnA|4e-12|30.7|231/306| RP:PDB:NREP 1 RP:PDB:REP 28->337|2cbnA|2e-11|23.6|254/306| HM:PFM:NREP 4 HM:PFM:REP 39->70|PF00753|3e-06|31.2|32/194|Lactamase_B| HM:PFM:REP 259->318|PF05368|8.1e-05|30.2|53/233|NmrA| HM:PFM:REP 198->212|PF02197|0.00037|46.7|15/38|RIIa| HM:PFM:REP 313->324|PF05972|0.00038|41.7|12/16|APC_15aa| RP:SCP:NREP 1 RP:SCP:REP 21->337|1y44A1|8e-29|28.1|224/269|d.157.1.7| HM:SCP:REP 27->336|1y44A1|1.9e-42|29.5|254/0|d.157.1.7|1/1|Metallo-hydrolase/oxidoreductase| OP:NHOMO 176 OP:NHOMOORG 169 OP:PATTERN -----------------------1--------1-1------------1--111--------------- -------------------------1------1---------------------------11-----111---------------11111-11-11---1----------------------------------------------1-11111-111111111111-11-111111111-111111------1-111111111111111-1----11111---1--11---1---------------------111------1-1111--1-----111----111---11111111111-------------------------------------------111----------------------------1--------------1--------------------------------------------------------------------------------------------------------------------------------------------11-----1-------11-------------------------1-1-----------222-2222-------1-------------------------------------------------------------11---------1-----------------------------------111-----1-11111111111111-----------------------------------1--------------------------------------------------------------------------------------------------------11--------------------------------------- ----------------------------------------------------------------------------------------------------------------------11-11----1-111-1111-------------------------------------------1-1---------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 306 STR:RPRED 90.8 SQ:SECSTR #####################EEEEEGccEEEEcccHHHTccccGTTTEEEEEcccccHHHHTTHHHHHHHHTTccccEEEEEcTTHHHHHHHHHHHTTccccccEEEEEEEEcTEEcTT#####HHTTccccccEETccEEcccccEEEEEcccEEEEEEEcccccccEEEEEEEccccccccHHHHHHTTccccHHHEEEEcGGGTTHHHHHTcccEETTTEGG#####EccGGGTccccccccEEEEccccccccHHccTHHHHHTTccEEEEEccccGGGHHHHHHTTcccHHHHHHHHHHHTccEEEEEcccTTccHHHHHHHHHHHTTccc PSIPRED cccccEEEEEccccccccEEEEEEccccEEEEEEccccccccccccccccEEEEEcccHHHHccHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHcccccccccccccEEEEcccccccccccccccccccccccccccEEcccccEEEEcccEEEEEEEcccccccEEEEEEEcccccccHHHHHHccccccHHHHHHHcccEEEcccccEEEEEEEEccEEEEccccccccHHcccccccccEEEEEcccccccccHHHHHHHHHcccEEEEEccccHHHHHHHHHcccccHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHHHHccc //