[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58043.1
DDBJ      :             aminotransferase
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  782/915 : Eukaryota  185/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:433 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->408 1szsA PDBj 6e-46 33.8 %
:RPS:PDB   18->417 3du4A PDBj 2e-64 25.6 %
:RPS:SCOP  5->410 1sf2A  c.67.1.4 * 2e-68 31.0 %
:HMM:SCOP  11->413 1qj5A_ c.67.1.4 * 6.6e-110 39.2 %
:RPS:PFM   21->356 PF00202 * Aminotran_3 1e-43 38.6 %
:HMM:PFM   23->357 PF00202 * Aminotran_3 2.2e-83 35.5 327/339  
:BLT:SWISS 1->423 ECTB_WOLSU e-152 65.6 %
:PROS 232->269|PS00600|AA_TRANSFER_CLASS_3
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58043.1 GT:GENE ABA58043.1 GT:PRODUCT aminotransferase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(1735607..1736908) GB:FROM 1735607 GB:TO 1736908 GB:DIRECTION - GB:PRODUCT aminotransferase GB:PROTEIN_ID ABA58043.1 GB:DB_XREF GI:76883362 InterPro:IPR004637 InterPro:IPR005814 LENGTH 433 SQ:AASEQ MRIIEQLESEVRGYVRSFPVVFDTAKGSYLYDEQGNEYIDFFSGAGTLNYGHNNPIISKALLKYIERDGIIHGLDKATVAKVAFLQKFYDTILSPRNFEYKVQFTGPTGTNATETALKLARMIKRRSNVIAFTNGYHGLTMGSLAVTGNTFYRDESYGIRNNSAFMPYDGYFGPDVDTIEYFRRFLEDSSSGVDLPAAVILETVQAEGGINVASDEWLRRLERLCREFDILLIVDDIQVGNGRTGTFFSFERAGITPDMVTLSKSIGGGLPLSLLLMRPELDQWKPGEHTGTFRGNNLAFVAAVESLSAYWENDDLTEAVKYKGEIIETELKAIAKKYPELNGKVRGVGMIWGLEMPRNGFTSEVSKEAFENGVIIEIAGADDQVLKFLPSLTIEETILREGLGIIDQAIGNLLTRKREKRSGNTQQLATEAV GT:EXON 1|1-433:0| BL:SWS:NREP 1 BL:SWS:REP 1->423|ECTB_WOLSU|e-152|65.6|421/427| PROS 232->269|PS00600|AA_TRANSFER_CLASS_3|PDOC00519| SEG 216->227|ewlrrlerlcre| SEG 262->276|lsksiggglplslll| BL:PDB:NREP 1 BL:PDB:REP 12->408|1szsA|6e-46|33.8|382/425| RP:PDB:NREP 1 RP:PDB:REP 18->417|3du4A|2e-64|25.6|390/447| RP:PFM:NREP 1 RP:PFM:REP 21->356|PF00202|1e-43|38.6|321/336|Aminotran_3| HM:PFM:NREP 1 HM:PFM:REP 23->357|PF00202|2.2e-83|35.5|327/339|Aminotran_3| GO:PFM:NREP 2 GO:PFM GO:0008483|"GO:transaminase activity"|PF00202|IPR005814| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00202|IPR005814| RP:SCP:NREP 1 RP:SCP:REP 5->410|1sf2A|2e-68|31.0|400/425|c.67.1.4| HM:SCP:REP 11->413|1qj5A_|6.6e-110|39.2|388/429|c.67.1.4|1/1|PLP-dependent transferases| OP:NHOMO 4361 OP:NHOMOORG 1034 OP:PATTERN 33221234555555531333333333342253221222222221131122343154523233228-23 37528324444331B5555-59227C555556D88837BC665632331334334433119461B5CDDA61111121-11253324312221311-11536465747251------1-12222-22232323322655871117643322242233333333322454723333333333334444411-869999999888A898987A66778AB76574443333338926666665666666656636-------2---2222-----231111-------121------------------------1--111----26256-------2-252663111313--4124411333333333323222432344411111548474434445355555454546-122112264D329887A8C77B7843342246635566A33333333633224462222222222---------------21222135336A9869DDBBB68887998B999957A99233312346445116373554422323632222123332253-26562443242232323322544221245554123233333122122221234323336542637344763343553333433444431--454221-22266982776665655566-6666755666657666665ACA5A8B366665666666666667542555532445555455555--23111113333357654443133111122226665555243669A9A7HAE6DCC959BD411112211533345666658455332434533311112312332222------------------------------------1222212111632 11--442-1---1133654624476A566333344454442444333478A7BA3343354324622644333353313344253524-34363434443453554-4-2415344322-223-642417L5-43424116124221-1-31143543459826243253F44432553c332545ACB4875354753 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 433 STR:RPRED 100.0 SQ:SECSTR HGHHHHHHHHcccccccccccEEEEEcTEEEETTccEEEETTHHHHTcccccccHHHHHHHHHHHTTcccccccccccHHHHHHHHHHHHHHHccTTEEEcEEEEEccHHHHHHHHHHHHHHHHHccEEEEETTccccccHHHHHTcccTTTccccGGGcccEEEEccccTTcccccHHHHHHHHHHHHHHGGGEEEEEEEccEEcTTTcEEccTTHHHHHHHHHHHTTcEEEEEcTTTTTTTTccccGGGGGTccccEEEEcGGGGTTccccEEEEEEHTTcccccccccTTTTcHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTcTTTTEEEEEEETTEEEEEEcccTTTccHHHHHHHTTEEccEETTTTTEEEEcccTTccHHHHHHHHHHHHHHHHHHHTTccHHTcccccGGGTcEE DISOP:02AL 416-433| PSIPRED ccccccccccHHHccccccEEEEEccccEEEEcccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcccccccccEEEEEccccHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHcccccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHcccccEEEEEEEEEccccccccccHHHHHHHHHHHHHcccEEEEEcccccccHHcccEEEEccccEEccEEEEcHHHccccEEEEEEcHHHHHcccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHcccEEEEEEEEcccHHHHHHHHHHHHcccEEEEccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHcc //