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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58052.1
DDBJ      :             heat shock protein Hsp20
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  164/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
b.15.1
:173 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   88->173 1shsA PDBj 7e-06 30.2 %
:RPS:PDB   88->166 2byuA PDBj 1e-11 30.4 %
:RPS:SCOP  88->166 1gmeB  b.15.1.1 * 3e-14 32.9 %
:HMM:SCOP  28->173 1gmeA_ b.15.1.1 * 1.4e-36 36.3 %
:RPS:PFM   88->173 PF00011 * HSP20 3e-10 47.1 %
:HMM:PFM   73->171 PF00011 * HSP20 9.1e-23 35.1 97/102  
:BLT:SWISS 88->172 SP21_STIAU 1e-11 35.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58052.1 GT:GENE ABA58052.1 GT:PRODUCT heat shock protein Hsp20 GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1747688..1748209 GB:FROM 1747688 GB:TO 1748209 GB:DIRECTION + GB:PRODUCT heat shock protein Hsp20 GB:PROTEIN_ID ABA58052.1 GB:DB_XREF GI:76883371 InterPro:IPR002068 LENGTH 173 SQ:AASEQ MMAKDKRSKEVAHSEPRQEVRSGSVTHGLSPFEEMDQIFERFFPRGWLQPFRREWPMRNELMTPFEVQMPRVDVIDRDEEVVVRAEIPGVDKKDLDVSVTENTVTINGHRSAEEEEDTGDYYRREISRGAFSRTVMLPREVDGEKAKVSFKEGTLELILPKVEKSKRHKIKVE GT:EXON 1|1-173:0| BL:SWS:NREP 1 BL:SWS:REP 88->172|SP21_STIAU|1e-11|35.3|85/188| SEG 71->87|rvdvidrdeevvvraei| BL:PDB:NREP 1 BL:PDB:REP 88->173|1shsA|7e-06|30.2|86/115| RP:PDB:NREP 1 RP:PDB:REP 88->166|2byuA|1e-11|30.4|79/101| RP:PFM:NREP 1 RP:PFM:REP 88->173|PF00011|3e-10|47.1|85/101|HSP20| HM:PFM:NREP 1 HM:PFM:REP 73->171|PF00011|9.1e-23|35.1|97/102|HSP20| RP:SCP:NREP 1 RP:SCP:REP 88->166|1gmeB|3e-14|32.9|79/109|b.15.1.1| HM:SCP:REP 28->173|1gmeA_|1.4e-36|36.3|146/0|b.15.1.1|1/1|HSP20-like chaperones| OP:NHOMO 246 OP:NHOMOORG 177 OP:PATTERN ----------------------------------1------------11-----111---1------- -11-------------1---------------------11------------------------------------------11111------------1---1-1113-------------------1-11-21----221--12222411-1111--------1-3253---------------1111--------------------------------------------------------------------------------------------------------------------------------------------------------------1--1--------11--11111-----212--------1-2-31-1---------------1--11-21--1---------31---1---------1-------------1---------------------------1-------1----1------2--1-11111111-11111-2----21---31---------1-----11-------------11-113-2-111-----1-21222312212112-23--------------------1-11211----1---1--------------1---------3-12---------------------------------------------------------------------------------------------1111111111-22--------------------------1----------1---1------------1------------------------------3-111111--------------------------------------11----1--1- --------------1-----------------------------------------------------------------------16-1-----------2-------3----------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 146 STR:RPRED 84.4 SQ:SECSTR ###########################ccEEHHHHHHHHHHHHHHTcccEEccTTTccccccTTGGGGGcEEEcTTccEEEEEEEEcTTccGGGEEEEEETTEEEEEEccccccccTTccccccccccccEEEEEEccccccGGGcEEEEETTEEEEEEEccccccccccccc DISOP:02AL 1-28, 112-115, 163-173| PSIPRED cccHHHHcccHHHcccccccccccccccccHHHHHHHHHHHHcccccccccccccccHHHHcccccccccEEEEEEcccEEEEEEEEcccccccEEEEEEccEEEEEEEEccccccccccEEEEEEEccEEEEEEEcccccccccEEEEEEccEEEEEEEcccccccEEEEcc //