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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58061.1
DDBJ      :             Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+)
Swiss-Prot:             

Homologs  Archaea  43/68 : Bacteria  820/915 : Eukaryota  95/199 : Viruses  0/175   --->[See Alignment]
c.2.1c.58.1c.77.1
:783 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   17->348 2a9fB PDBj 5e-72 45.8 %
:BLT:PDB   457->761 1td9D PDBj 1e-62 40.1 %
:RPS:PDB   3->403 2a9fA PDBj e-106 41.0 %
:RPS:PDB   467->761 2af4C PDBj 4e-93 37.9 %
:RPS:SCOP  6->159 1vl6A2  c.58.1.3 * 1e-54 46.4 %
:RPS:SCOP  160->403 1vl6A1  c.2.1.7 * 7e-46 43.1 %
:RPS:SCOP  467->761 1qztA  c.77.1.5 * 3e-95 37.9 %
:HMM:SCOP  6->159 1vl6A2 c.58.1.3 * 4.4e-52 54.5 %
:HMM:SCOP  161->449 1gq2A1 c.2.1.7 * 4.7e-84 49.8 %
:HMM:SCOP  454->779 1qztA_ c.77.1.5 * 2.6e-98 39.2 %
:RPS:PFM   30->149 PF00390 * malic 5e-12 49.1 %
:RPS:PFM   163->403 PF03949 * Malic_M 2e-38 53.6 %
:RPS:PFM   404->482 PF00589 * Phage_integrase 8e-05 38.0 %
:RPS:PFM   458->761 PF01515 * PTA_PTB 2e-77 46.7 %
:HMM:PFM   468->771 PF01515 * PTA_PTB 1.2e-100 46.4 304/319  
:HMM:PFM   161->403 PF03949 * Malic_M 2.4e-68 47.3 226/255  
:HMM:PFM   17->149 PF00390 * malic 2.3e-28 34.8 132/182  
:BLT:SWISS 4->760 MAO2_HAEIN e-176 46.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58061.1 GT:GENE ABA58061.1 GT:PRODUCT Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(1756863..1759214) GB:FROM 1756863 GB:TO 1759214 GB:DIRECTION - GB:PRODUCT Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) GB:NOTE Phosphate acetyltransferase GB:PROTEIN_ID ABA58061.1 GB:DB_XREF GI:76883380 InterPro:IPR002505 InterPro:IPR012301 InterPro:IPR012302 LENGTH 783 SQ:AASEQ MIFRDEALEYHRRGRAGKLEVIPSKPCLTQHDLALAYSPGVAEPCREIHRSPDDVYLYTGKGNLVAVVTNGTAVLGLGPLGPLASKPVMEGKGVLFKRFADIDVFDIELNAPTAEEVIQACQLLEPTFGGINLEDIAAPDCFHIEERLRETLTIPVFHDDQHGTAIISGAALLNACELAGKRLEDIKLVMNGAGAASIACAKFYLTLGVDPDNLLLCDSKGVLYKGREDLMPGRPRYNEYKAQFIRPTRLRTLPEALAGADAFCGLSVANVVTPDMVRSMNDNPIIFALANPDPEITYPDALAARPDVIMATGRSDYPNQVNNVLGFPFIFRGALDVRARAINEAMKVAAAQALAALAKEGVPESVCRAYGMERIEFGREYLIPKPFDPQVLLEVTTAVAKAAGESGVARVPIRDFRAYREQLERRLGRSKEVMRQVINKARRRSQLSTQHLESKTSPVEKPVSPGPLRIAFPEGDDKRIIRAAARIVKEGIGKPVLLGKPDEIQALAKQLSVNLEGIDLLDSQTHPQREDLAQQFFAMRARKGVTLAEARRYMLRRHYYAPMLLLQGEVEAVVCGETYHYPDSIRPALQILPLAKGISHASGLYMLLFKNRLIFCADTTVNITPDAETLAEIALSAADTAHHFDIEPRVALLSFSNFGSVKHSLVDLVQAAVKILHRRRPDLVVDGEMQADTATNEDILSSTYPFSRLKEDANVLIFPDLTSGNIAYKLLVELGGAEAIGPILTGLSKPYHVLQRDASVDAIVNIAAIAAVQAQEIELSQQA GT:EXON 1|1-783:0| BL:SWS:NREP 1 BL:SWS:REP 4->760|MAO2_HAEIN|e-176|46.8|730/756| SEG 75->83|lglgplgpl| SEG 349->358|aaaqalaala| SEG 762->778|aivniaaiaavqaqeie| BL:PDB:NREP 2 BL:PDB:REP 17->348|2a9fB|5e-72|45.8|323/380| BL:PDB:REP 457->761|1td9D|1e-62|40.1|304/325| RP:PDB:NREP 2 RP:PDB:REP 3->403|2a9fA|e-106|41.0|378/383| RP:PDB:REP 467->761|2af4C|4e-93|37.9|293/331| RP:PFM:NREP 4 RP:PFM:REP 30->149|PF00390|5e-12|49.1|116/180|malic| RP:PFM:REP 163->403|PF03949|2e-38|53.6|220/254|Malic_M| RP:PFM:REP 404->482|PF00589|8e-05|38.0|71/168|Phage_integrase| RP:PFM:REP 458->761|PF01515|2e-77|46.7|304/317|PTA_PTB| HM:PFM:NREP 3 HM:PFM:REP 468->771|PF01515|1.2e-100|46.4|304/319|PTA_PTB| HM:PFM:REP 161->403|PF03949|2.4e-68|47.3|226/255|Malic_M| HM:PFM:REP 17->149|PF00390|2.3e-28|34.8|132/182|malic| GO:PFM:NREP 8 GO:PFM GO:0016616|"GO:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"|PF00390|IPR012301| GO:PFM GO:0016616|"GO:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"|PF03949|IPR012302| GO:PFM GO:0051287|"GO:NAD or NADH binding"|PF03949|IPR012302| GO:PFM GO:0003677|"GO:DNA binding"|PF00589|IPR002104| GO:PFM GO:0006310|"GO:DNA recombination"|PF00589|IPR002104| GO:PFM GO:0015074|"GO:DNA integration"|PF00589|IPR002104| GO:PFM GO:0008152|"GO:metabolic process"|PF01515|IPR002505| GO:PFM GO:0008415|"GO:acyltransferase activity"|PF01515|IPR002505| RP:SCP:NREP 3 RP:SCP:REP 6->159|1vl6A2|1e-54|46.4|153/154|c.58.1.3| RP:SCP:REP 160->403|1vl6A1|7e-46|43.1|218/222|c.2.1.7| RP:SCP:REP 467->761|1qztA|3e-95|37.9|293/332|c.77.1.5| HM:SCP:REP 6->159|1vl6A2|4.4e-52|54.5|154/154|c.58.1.3|1/1|Aminoacid dehydrogenase-like, N-terminal domain| HM:SCP:REP 161->449|1gq2A1|4.7e-84|49.8|271/0|c.2.1.7|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 454->779|1qztA_|2.6e-98|39.2|324/0|c.77.1.5|1/1|Isocitrate/Isopropylmalate dehydrogenase-like| OP:NHOMO 1748 OP:NHOMOORG 958 OP:PATTERN 11---12111111112-11111-111111112------------1--11-222-11111-11111--- 1-22311222211122211-12--2211111122222275111112321111233111--334-2224332111111121131--1--2222222211112211211111------------------11--112-11111----113223321111------12111111------------111--11123344444333332343333333333333313111111111112222222222222222222321144111112211431112122112222-1122111111111111222222222222221111111122311333332232222122221323222222--12111122213332211212222222222314221111511213131121113-11411311221122212222223313112335322322411111111111--3231111111121111121111111111111111121-333323344433323433332223224443432-1222212233323321131-1121222222222-22222--222321322224342233212222--122222222222212-1-211211112223332314122122222223222222222321-2212211111132222213333333233-33333333333333333333332222233333333333333332332222311222222222222--11-----2222-121221222222222222222222122224-22222222223233222111111111-222233333433331111111111111111-211--111111111121-11111-2-11111111111111---1121111111--2 ----------1----11---11----11111-111--1-1111111--111111-1111111----1---1------------------12112-1111111-------1--3-416-----11---1-161-1-1-------2111-111--213221---111----24---1-222A112-31--2--1--2221- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 757 STR:RPRED 96.7 SQ:SECSTR EHccccTTHHHHHcHTcccccccccccccHHHHHHHcTTTTHHHHHHHHHcGGGHHHHcGGGTEEEEEEcccccTTcccccHHHHHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHGGGccEEEEccccTTHHHHHHHHHHHHccccEEEHHHHHHHHHHHHHHHHHHHTTTccTTccEEEEEcccHHHHHHHHHHHHHTccGcEEEEEETTEEccTTcccccHHcTTcccHHHHHccTTccccccHHHHTTccEEEcccTTcccHHHHHTcccccEEEEcccccccccHHHHHTTTcccEEEEccTTccccccGGGTHHHHHHHHHHHTcccccHHHHHHHHHHHHHTccccTcHHHHHHHHHTcccccccccccccTTHHHHHHHTTTTccccHHHTcccccccHHHHHHHHHHHHHHHHHHTHHHHHHHHGG####THHHHTTccccccccccTcccEEEEccTTcHHHHHHHHHHHHHTccEEEEEccHHHHHHHHcccTcccTTcEEEcTTccTTHHHHHHHHHHHHGGGTccHHHHHHHTTcHHHHHHHHHHTTcccEEEEcTTcccHHHHHHHHHHTcccTTccccEEEEEEEccTTEEEEETccccccccHHHHHHHHHHHHHHHHHHHcccEEEEEccccTTccccHHHHHHHHHHHHHHHHcTTcEEEEEEcHHHHHcHHHHHHHcTTcccTTcccEEEcccHHHHHHHHHHHHHTcccEEEEEEEEcccccEEEccTTccHH###################### DISOP:02AL 1-2, 778-783| PSIPRED ccHHHHHHHHHHcccccEEEEEEccccccHHcccEEEcccHHHHHHHHHHcHHHHEEccccccEEEEEcccccEEccccccccccccccHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHcccEEEEEEHHHcccHHHHHHHHHHHHccccEEcccccHHHHHHHHHHHHHHHHccccEEcEEEEEEcccHHHHHHHHHHHHHccccccEEEEccccEEEcccccccHHHHHHHHHHHHHHcHHHcccHHHHHccccEEEEccccccccHHHHHHHccccEEEEcccccccccHHHHHHHcccEEEEEccccccccEEEEHHHHHHHHHHHHHccEEccHHHHHHHHHHHHHHccccccHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHcccccccEEEEcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHccHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHccccccccEEEEEEEEEccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccccccHHHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHHHHcccccccccccEEEEccccHHHHHHHHHHHHHccEEEcHHHHcccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHcc //