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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58074.1
DDBJ      :             ATPase
Swiss-Prot:TTCA_NITOC   RecName: Full=tRNA 2-thiocytidine biosynthesis protein ttcA;

Homologs  Archaea  44/68 : Bacteria  473/915 : Eukaryota  126/199 : Viruses  0/175   --->[See Alignment]
c.26.2
:302 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   26->200 1wy5A PDBj 2e-09 28.0 %
:RPS:PDB   23->259 2dplB PDBj 3e-30 15.8 %
:RPS:SCOP  32->235 1jgtA1  c.26.2.1 * 8e-29 12.2 %
:HMM:SCOP  13->233 1wy5A1 c.26.2.5 * 6.3e-54 35.5 %
:RPS:PFM   38->205 PF01171 * ATP_bind_3 7e-30 45.3 %
:HMM:PFM   39->201 PF01171 * ATP_bind_3 2.1e-18 29.0 155/182  
:BLT:SWISS 1->302 TTCA_NITOC e-177 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58074.1 GT:GENE ABA58074.1 GT:PRODUCT ATPase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(1776324..1777232) GB:FROM 1776324 GB:TO 1777232 GB:DIRECTION - GB:PRODUCT ATPase GB:PROTEIN_ID ABA58074.1 GB:DB_XREF GI:76883393 InterPro:IPR011063 LENGTH 302 SQ:AASEQ MNKQSRKAQYNANKLQKRLRRLVGQAIETFNMIEDGDRLMVCLSGGKDSYALLDILLSLQKHAPVKFDLIAVNLDQKQPGFPEHVLPHYLESLGVSYRIVEQDTYSVVKRVIPEGKTTCSLCSRLRRGILYGTAEELGATKIALGHHRDDILETFFLNMFHGGTLKGMPPKLLSDNGRHIVIRPLAYCREKDLETYAHLKAFPIIPCNLCGSQANLQRQAIKAMMKAWDKQFPGRLETMFRALQNVKPSHLADSTLYNFQGLQKQESPFPEGDKAFDEEVFLESQEKSPPFHGSKIRVLQFK GT:EXON 1|1-302:0| SW:ID TTCA_NITOC SW:DE RecName: Full=tRNA 2-thiocytidine biosynthesis protein ttcA; SW:GN Name=ttcA; OrderedLocusNames=Noc_1596; SW:KW ATP-binding; Complete proteome; Cytoplasm; Nucleotide-binding;tRNA processing. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->302|TTCA_NITOC|e-177|100.0|302/302| GO:SWS:NREP 4 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0008033|"GO:tRNA processing"|tRNA processing| BL:PDB:NREP 1 BL:PDB:REP 26->200|1wy5A|2e-09|28.0|168/311| RP:PDB:NREP 1 RP:PDB:REP 23->259|2dplB|3e-30|15.8|234/278| RP:PFM:NREP 1 RP:PFM:REP 38->205|PF01171|7e-30|45.3|161/185|ATP_bind_3| HM:PFM:NREP 1 HM:PFM:REP 39->201|PF01171|2.1e-18|29.0|155/182|ATP_bind_3| RP:SCP:NREP 1 RP:SCP:REP 32->235|1jgtA1|8e-29|12.2|197/290|c.26.2.1| HM:SCP:REP 13->233|1wy5A1|6.3e-54|35.5|211/0|c.26.2.5|1/1|Adenine nucleotide alpha hydrolases-like| OP:NHOMO 751 OP:NHOMOORG 643 OP:PATTERN --2-1222------11212-21-11--1-1-1222---11-1111111-1111-1111111---1111 --1---------------------------------------------------------------------------------12121112-1------------1---111111111111111---1----1------------1--1---------------------------------111--111---------1---1--------------------------11------------------------------------------------------------------------------------------221-144444442432211322222211-32-2--2111221-2212-12-1-----111-1-------------11111111111---------11--111111111111--11-1-11111111---------------------------------------------------1111111111111111111111111111111111111111111111111111111111111111111111111111112112112-12111111211111121111111111111111111111111111111111111111211111111111111111--111-1------11111111111111111-1111111111111111111111111111111111111111111111111111-111111111111---1111111111111111111111111-1111111111111111111111111111111112221222221111111111111111111111111111111----------------1--------------------1-------1-1-1-1-1--- 1112223-2112111-11-1111111-11-1-1111-111-11---1111111111111---1-11111111111-----111111-1-1111111111--1111-111241-111------------------------------------------1--11212111112222111-611-111115111211-112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 294 STR:RPRED 97.4 SQ:SECSTR ########HHHHHHHHHHHHHHHHHHHHHHHHHHTTccEEEEccccHHHHHHHHHHHHHHHHHGGGEEEEEEEcccccTTHHHHHHHHHTTTcccEEEEEEHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHTccEEEcccccEEEcTTTTccHHHHHHHHTccHHHHTccTTGGGGGccccccHHHHHHHHHHHHHHHHHTTccccEEEEEEcccccccccccTTcccEEEEEEEEEEcccccEEEccccHHHccTTcccccccccGGGcccccEEEcccTTcGGGEEEETTcHHH DISOP:02AL 1-5, 263-275, 277-279, 283-287| PSIPRED cccccccccccHHHHHHHHHHHHHHHHHHccccccccEEEEEEcccHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHHHHcccEEEEEEcHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHccccHHHHcccEEHccccEEEEcccccccHHHHHHHHHHccccEEccccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEEEEEEc //