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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58092.1
DDBJ      :             Glycoside hydrolase
Swiss-Prot:             

Homologs  Archaea  13/68 : Bacteria  194/915 : Eukaryota  45/199 : Viruses  0/175   --->[See Alignment]
a.102.1
:612 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   245->409 1gaiA PDBj 9e-08 31.8 %
:RPS:PDB   221->610 1agmA PDBj 4e-53 16.8 %
:RPS:SCOP  221->612 1agmA  a.102.1.1 * 4e-55 15.6 %
:HMM:SCOP  196->611 2fbaA1 a.102.1.1 * 2.3e-106 37.9 %
:RPS:PFM   232->545 PF00723 * Glyco_hydro_15 7e-11 27.3 %
:HMM:PFM   227->601 PF00723 * Glyco_hydro_15 1.1e-58 27.4 365/448  
:BLT:SWISS 6->590 YAY3_SCHPO e-139 45.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58092.1 GT:GENE ABA58092.1 GT:PRODUCT Glycoside hydrolase GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1804840..1806678 GB:FROM 1804840 GB:TO 1806678 GB:DIRECTION + GB:PRODUCT Glycoside hydrolase GB:PROTEIN_ID ABA58092.1 GB:DB_XREF GI:76883411 InterPro:IPR011613 LENGTH 612 SQ:AASEQ MAYQPIENYGMIGDLRTAALVGINGSIDWLCIPHFDSPSVFAALLDDKKGGRFQVAPIDNGAKCKQFYWPETNVLVTRFLAPEGAIEVTDFMPVSKAVAGEPHFHQLVRRVTAVRGRSRLRLTCHPAFNFARDEHTTALVDNGAEFYSKDLNLALSARIPLQRKGEGVEAEFTLNQGETAVFILHQITAESRCAPCLSVAEAEASFRQTVLYWRQWLGKCTYQGRWREMVYRSALALKLLTFEPSGAIIAAPTCSLPEDLGGVRNWDYRYTWIRDSAFTVYALLRIGFTEEAERFMQFIESLCPAVATERPLQIMYRIDGGRDIPEEILDHMEGYRGSRPVRVGNAAYRQLQLDIYGELMDAVYLHNKYGAPISHDLWVRLRRLVDWVCENWQQPDAGIWEVRGGHKHFVYSKLMCWVAIDRALRLAHQRSFPADRGHWLKVRDQIYLDIMEKGWHPERQAFVQHYESGALDAANLTLPLMQFLSPTDPRMLKTLDAILKPPELGGLVSNSLVFRYNLGETEDGLEGDEGTFNICTFWLVEALTRAGRHHPPRLEEARLIFERMLGYANHLGLYAEETGYSGEALGNFPQAFTHLALITAAFNLDQTLDSRH GT:EXON 1|1-612:0| BL:SWS:NREP 1 BL:SWS:REP 6->590|YAY3_SCHPO|e-139|45.3|578/649| SEG 518->531|lgetedglegdegt| BL:PDB:NREP 1 BL:PDB:REP 245->409|1gaiA|9e-08|31.8|148/472| RP:PDB:NREP 1 RP:PDB:REP 221->610|1agmA|4e-53|16.8|375/470| RP:PFM:NREP 1 RP:PFM:REP 232->545|PF00723|7e-11|27.3|304/402|Glyco_hydro_15| HM:PFM:NREP 1 HM:PFM:REP 227->601|PF00723|1.1e-58|27.4|365/448|Glyco_hydro_15| GO:PFM:NREP 2 GO:PFM GO:0004339|"GO:glucan 1,4-alpha-glucosidase activity"|PF00723|IPR011613| GO:PFM GO:0005976|"GO:polysaccharide metabolic process"|PF00723|IPR011613| RP:SCP:NREP 1 RP:SCP:REP 221->612|1agmA|4e-55|15.6|379/470|a.102.1.1| HM:SCP:REP 196->611|2fbaA1|2.3e-106|37.9|401/0|a.102.1.1|1/1|Six-hairpin glycosidases| OP:NHOMO 383 OP:NHOMOORG 252 OP:PATTERN ------2222223222---------------------------------------------121---- 1-213--1111---22211-11--1111111111113243154321111211233111--545-1155522-----------2--------1-1---------1121-11---------------11---1--1-1---------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11----------1--1-----1-11133111111------------331231331-1--------121-----11------------------111-1---------------------------------111------12112121111122311111111221211--111-1211-1111----1--------------1--------1---------1121-----221233--------------------------------------------------------------211--------1-------------------------------------------------------------------------------------------------1--------------------------------1111-121--212------------------------1133333232--------11--------------------------------------------------11- ----22--------1--11-222111--------------------1111111111111111------------------------11-111-11111111--112---2-------------------------------------------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 611 STR:RPRED 99.8 SQ:SECSTR ccccccEEEEEEEETTTTEEEEETTEEEEEEEEEETTTTEEEEEEEEccTTcEEEccTTcEEEEEEEEETTEEEEEEEETTTccEEEEEEEEEEcccccccEEEEcTTcccEEEEEEcEEEEEEEEEEcccccTTTccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHTTcEEEccccTcEEEcHHHcTTcTTcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHTTccTTTcTTcTTccTTcccccccccccccccEEHHHHHHHHHHHHHTTcGGGHHHHHHHHHHHHHHHHccTTccTTTTGGGccEEcTTccccccccccccTcccHHHHHHHHHHHHHHHHHHHHHHHTTcHHHHHHTHHHHHHHHHHHHHHHTTccEEcTTcccEEEEEEHHHHHHHHHHHHHHHHHHHHTTcccHcccHHHHHHHHHHHHHGGGccccccccEEccccccccTHHHHHHHTccTcTTcHHHHHHHHHHTTTcGGGTTccTTccccccHHccTTccGGGccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccTTcccccEcTTTccEEcccccHHHHHHHHHHHHHHTTccccc# DISOP:02AL 609-612| PSIPRED ccccccHHcEEEEcccEEEEEEccccEEEEEccccccHHHHHHHcccccccEEEEEEcccccEEEEEEEccccEEEEEEEccccEEEEEEEEcccccccccccccEEEEEEEEEccccEEEEEEEEcccccccccEEEEccccEEEEccccEEEEEccccEEEcccEEEEEEEEccccEEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccEEEEccccccccccccccccccEEEHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccEEEEccccccccHHHccccccccccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccEEEccEEEEHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccEEEccccccccccHHHHHHHHHHHHHHHHHHHHcccc //