[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58096.1
DDBJ      :             DAHP synthetase I/KDSA
Swiss-Prot:             

Homologs  Archaea  27/68 : Bacteria  256/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.1.10
:370 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->355 1vr6A PDBj 2e-39 35.8 %
:RPS:PDB   105->365 3e9aA PDBj 3e-18 21.6 %
:RPS:SCOP  1->363 1rzmA  c.1.10.4 * 1e-48 33.4 %
:HMM:SCOP  1->364 1rzmA_ c.1.10.4 * 5.4e-72 34.0 %
:RPS:PFM   105->340 PF00793 * DAHP_synth_1 2e-17 32.7 %
:HMM:PFM   101->349 PF00793 * DAHP_synth_1 1.5e-44 28.4 236/272  
:BLT:SWISS 1->355 AROF_THEMA 6e-39 35.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58096.1 GT:GENE ABA58096.1 GT:PRODUCT DAHP synthetase I/KDSA GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(1811990..1813102) GB:FROM 1811990 GB:TO 1813102 GB:DIRECTION - GB:PRODUCT DAHP synthetase I/KDSA GB:PROTEIN_ID ABA58096.1 GB:DB_XREF GI:76883415 InterPro:IPR006218 LENGTH 370 SQ:AASEQ MIIILRPNTDKNSDEYRETLRYLHNLPNILIREHQEIGVQQILTELYLIGETSAITSEEIALLPGVERVVRVSEEYRILGRHKDETRSSHFEYNGVLFSQNNFNVFAGLCAVDTREHIDLMMRALQANQQVCTRMGAYKPRTSPYAFQGHGKSCLPDVFELAGKYGIKIVAMEITHESHIHEIDEALSNTGHPTGVMLQIGTRNTQNFELLKIAGRQQKYPVLLKRGFGITLEESLNAAEYLASEGNRRVIFCLRGMKTSASDPHRNFVDFAHVPTIKRLTRMPVRIDPSHSVGSRAQSPDGIMDIMHVTAQGIIAGANMVLADFHPAPEKALVDGPQALLIKELPRFLEDIAIAREAYEKRVALFAQPL GT:EXON 1|1-370:0| BL:SWS:NREP 1 BL:SWS:REP 1->355|AROF_THEMA|6e-39|35.8|327/338| SEG 66->77|vervvrvseeyr| BL:PDB:NREP 1 BL:PDB:REP 1->355|1vr6A|2e-39|35.8|327/343| RP:PDB:NREP 1 RP:PDB:REP 105->365|3e9aA|3e-18|21.6|241/275| RP:PFM:NREP 1 RP:PFM:REP 105->340|PF00793|2e-17|32.7|220/278|DAHP_synth_1| HM:PFM:NREP 1 HM:PFM:REP 101->349|PF00793|1.5e-44|28.4|236/272|DAHP_synth_1| GO:PFM:NREP 1 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00793|IPR006218| RP:SCP:NREP 1 RP:SCP:REP 1->363|1rzmA|1e-48|33.4|335/338|c.1.10.4| HM:SCP:REP 1->364|1rzmA_|5.4e-72|34.0|338/0|c.1.10.4|1/1|Aldolase| OP:NHOMO 371 OP:NHOMOORG 284 OP:PATTERN 11-1--1111111111-111111-------------------------------11-111-111---- 223-----------------------------------------------------------1-------1--------1111-----11111111-11-111111-1--1111111-111111------1---1-22211222421121221----------11123332------------1112211-211111112112111211111111111111111111111111111111111111111111111----------11----1--11-------1111--------------1111111111111----------12112111111121232111111112-13--2222432511422221-11221-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1---------2---12--------1----12132222211313-33-------------------------22----1-----------1----------------11----------------------------------------------------------------------------------------------1------111--1--------------------------------------------------------1--1----------11---------------2--1111----------1---------------------------1--1-111-1- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 358 STR:RPRED 96.8 SQ:SECSTR EEEEEcTTccHHHHHHHHHHHHHTTEEE#######EEEEccccEEEEEEEEEccccHHHHHTcTTEEEEEEccccccTTcTcccccccccEEccTEEEcTTccEEEEEEEEcccHHHHHHHHHHHHHHHHHHEEEEEccccccccccccccHHHHHHHHHHHHHHccEEEEEEcccGGGHHHHHTTccHHTccTccEEEEcGGGTTcHHHHHHHHHTTccEEEEEccTTccGGGHHHHHHHHHHTTcccEEEEEccEEccTTccccEEccTHHHHHHHHHTcccEEEEHHHHTccGGGccGcTTHHHHHHHHHHHTcccEEEEEEEccGGGccccGGGcEEGGGHHHHHHHHHHHHHHHHHcccc##### DISOP:02AL 295-300| PSIPRED cEEEEcccccHHHHHHHHHHHHHHHHHHccccEEEEEccccEEEEEEEEcccccccHHHHHHcccHHEEEccccccccEEEccccccccEEEEccEEEcccEEEEEEEccccccHHHHHHHHHHHHHHHHHHEEEEEEEccccccccccccHHHHHHHHHHHHHHccEEEEEcccccccccHHHHHccHHHHccccEEEEcccccccHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHHHcccccEEEEEcccccccccccccHHHHHHHHHHHHHccccEEEEccccccccccccccHHHHHHHHHHHHHccccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccc //