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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58124.1
DDBJ      :             transcriptional regulator, XRE family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:76 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->64 3g5gN PDBj 2e-05 35.1 %
:RPS:PDB   1->67 2aw6B PDBj 2e-12 20.0 %
:RPS:SCOP  1->66 2o38A1  a.35.1.13 * 7e-11 22.7 %
:HMM:SCOP  1->70 2b5aA1 a.35.1.3 * 2.5e-14 36.2 %
:HMM:PFM   7->59 PF01381 * HTH_3 3.8e-16 43.1 51/55  
:BLT:SWISS 1->75 RPC_BPPH1 2e-07 41.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58124.1 GT:GENE ABA58124.1 GT:PRODUCT transcriptional regulator, XRE family GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1847033..1847263 GB:FROM 1847033 GB:TO 1847263 GB:DIRECTION + GB:PRODUCT transcriptional regulator, XRE family GB:PROTEIN_ID ABA58124.1 GB:DB_XREF GI:76883443 InterPro:IPR001387 LENGTH 76 SQ:AASEQ MSVGKNIKGLRIAAGLTQTQLAKEARINQSGLSKIEREENESITLPTLRKIAKALDCSVVALLEDKDKGKKLRELT GT:EXON 1|1-76:0| BL:SWS:NREP 1 BL:SWS:REP 1->75|RPC_BPPH1|2e-07|41.9|74/144| BL:PDB:NREP 1 BL:PDB:REP 7->64|3g5gN|2e-05|35.1|57/75| RP:PDB:NREP 1 RP:PDB:REP 1->67|2aw6B|2e-12|20.0|65/286| HM:PFM:NREP 1 HM:PFM:REP 7->59|PF01381|3.8e-16|43.1|51/55|HTH_3| RP:SCP:NREP 1 RP:SCP:REP 1->66|2o38A1|7e-11|22.7|66/89|a.35.1.13| HM:SCP:REP 1->70|2b5aA1|2.5e-14|36.2|69/0|a.35.1.3|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 2 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 76 STR:RPRED 100.0 SQ:SECSTR ccHHHHHHHHHHHTTccHHHHHHTTTccHHHHHHHHTTccTcccHHHHHHHHHHHTccHHHHHHHHTTHHccccHE DISOP:02AL 68-76| PSIPRED ccHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHccccccccHHHHHHHHHHHcccHHHHccccccccHHHccc //