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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58127.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:295 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   26->125 2r6fB PDBj 6e-04 27.0 %
:RPS:PFM   63->243 PF05472 * Ter 1e-04 26.2 %
:HMM:PFM   17->291 PF05472 * Ter 3e-19 24.4 250/290  
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58127.1 GT:GENE ABA58127.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(1849488..1850375) GB:FROM 1849488 GB:TO 1850375 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID ABA58127.1 GB:DB_XREF GI:76883446 LENGTH 295 SQ:AASEQ MNNVNSQLRATLATAMHHLEAQLGVLDRLLKEEESYPLWVWHEKDPSKARLQVRQIVTAIDYRDGQDPVSTRICPALVGVSCATLEAIRHANQAKADLQKALKSIDGIKIEEQNQETGTFLLRPLIKIALASLGHARLHRRQATRKFVILEQTPESVSFIWSRLPKIESIDIEEARRRLEARLEKVQGNPVLIKADLSRLDRLVSNERLAIVNPPHIHPRANIAWTIEKKTTRRGQKRAVLPIFYPSTRYDRLPRLRPLPEEPPLPGSRLRRNDATIETTPFLLTIRAHRYMSFA GT:EXON 1|1-295:0| COIL:NAA 29 COIL:NSEG 1 COIL:REGION 86->114| SEG 173->184|eearrrlearle| SEG 252->272|rlprlrplpeepplpgsrlrr| BL:PDB:NREP 1 BL:PDB:REP 26->125|2r6fB|6e-04|27.0|100/864| RP:PFM:NREP 1 RP:PFM:REP 63->243|PF05472|1e-04|26.2|164/291|Ter| HM:PFM:NREP 1 HM:PFM:REP 17->291|PF05472|3e-19|24.4|250/290|Ter| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF05472|IPR008865| GO:PFM GO:0005737|"GO:cytoplasm"|PF05472|IPR008865| GO:PFM GO:0006274|"GO:DNA replication termination"|PF05472|IPR008865| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 100 STR:RPRED 33.9 SQ:SECSTR #########################HHHHHHccTTccccEEEEcTTccEEEEcHHHHcccTTHHHHGGGEEEEcTTTTTcTTTEEcccccHHHHHTcHHHHHHHHHcccccHHHHHHTHHHHHHH########################################################################################################################################################################## DISOP:02AL 1-7, 266-268| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccEEEEEHHHHHHHHHHccccEEEEccccccccccEEEEEEHHHHccccccEEEEEEccccHHHcccccccccccccccHHHHHcccccEEEccEEEEEEEHHHHccc //