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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58128.1
DDBJ      :             Aminotransferase, class V
Swiss-Prot:             

Homologs  Archaea  48/68 : Bacteria  833/915 : Eukaryota  98/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:377 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   15->374 1i29A PDBj 1e-31 30.3 %
:RPS:PDB   16->371 2dr1B PDBj 5e-31 12.0 %
:RPS:SCOP  8->371 1elqA  c.67.1.3 * 5e-68 25.3 %
:HMM:SCOP  7->378 1c0nA_ c.67.1.3 * 8.1e-76 30.1 %
:RPS:PFM   16->357 PF00266 * Aminotran_5 6e-28 30.8 %
:HMM:PFM   16->346 PF00266 * Aminotran_5 3.8e-65 30.4 326/371  
:BLT:SWISS 3->361 CSD_METTH 2e-39 31.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58128.1 GT:GENE ABA58128.1 GT:PRODUCT Aminotransferase, class V GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1850459..1851592 GB:FROM 1850459 GB:TO 1851592 GB:DIRECTION + GB:PRODUCT Aminotransferase, class V GB:PROTEIN_ID ABA58128.1 GB:DB_XREF GI:76883447 InterPro:IPR000192 LENGTH 377 SQ:AASEQ MKKDYSDQFPQKKGIIYLNHAAVAPWPRRTAAAVKNFAEENVIIGALRYPQWLETEKKLRKLARLLINAPSADDIALIKNTSEGLSIVASGLDWQAGDNIVTSNQEFPSNLIPWQALAKRGVKLRETNLSVEPTPEDSLLAQIDEQTRLLTISSVQYASGLKMDLEKIGQFCRQRNILFCVDAIQSLGSLNFDCQTIHADFVIADGHKWMLGPEGMGIFYCRPEIKDQLQLHQFGWHMVEAIGDYDNKDWSIARSARRFECGSLNMIGIFALKESLDLLINQVSIAQVEQAVLANTAYLVERIQTEPKLQLLSSSSPDRYSGIVTFKHKKVDSSILYHHLIEQGVICALRGGGIRFSPHFYTPRTGLVQALNLCLNV GT:EXON 1|1-377:0| BL:SWS:NREP 1 BL:SWS:REP 3->361|CSD_METTH|2e-39|31.5|352/400| BL:PDB:NREP 1 BL:PDB:REP 15->374|1i29A|1e-31|30.3|343/405| RP:PDB:NREP 1 RP:PDB:REP 16->371|2dr1B|5e-31|12.0|342/374| RP:PFM:NREP 1 RP:PFM:REP 16->357|PF00266|6e-28|30.8|325/359|Aminotran_5| HM:PFM:NREP 1 HM:PFM:REP 16->346|PF00266|3.8e-65|30.4|326/371|Aminotran_5| GO:PFM:NREP 1 GO:PFM GO:0008152|"GO:metabolic process"|PF00266|IPR000192| RP:SCP:NREP 1 RP:SCP:REP 8->371|1elqA|5e-68|25.3|359/381|c.67.1.3| HM:SCP:REP 7->378|1c0nA_|8.1e-76|30.1|365/0|c.67.1.3|1/1|PLP-dependent transferases| OP:NHOMO 1857 OP:NHOMOORG 979 OP:PATTERN 221-2-11111111111---1---21112222-11-------133124-1111122111121--2-22 2252411111111122211-112213111111122233-111111-111111221--1--41113221121111111121323--11-1111112211112413532432111111111111111-----1---21433431-1245553444323422222223324443242222232222211111--112111111211122122222222212111222111111133111111111111111111112-111112-2111221111111111111111111111111111111111111111111111111111111-6245333334333321222211521123221-332321-222333-1-16-4322111111214231112221211111111112-2232222222111112112313213233221222222121111111111111223------------1-11-11111111---1121321122221122214555411215554234143321111122222234322312-22321111111112112112--------1-1--12321213413333542121-11------11111111111--1112223232254323333323333333333232-12323-11---33331333333333333-33333333333333333333433346233323333333333235333233331344454444454222122221112123212222222222222222333232211152555546533323433221222222221222333333444331222222222111111112222221111111121111111-1111111---1-111-111-21111-111311 1-11----2------11---121111-111111111111111111111-1-242--1--1-1--2-11----1--------------1----11----1----321-11-2--------1-1--11-2-------1---1-1-1---1-----------452-241-111---112112F111334112-115121122 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 377 STR:RPRED 100.0 SQ:SECSTR cHHHHHHTcTTTccccEEcccccccccHHHHHHTTcccccTTcHHHTTcHHHHHHHHHHHHHHHHHTTccccEEEEEcccHHHHHHHHHHHHHccTTcEEEEEEccHHHHHHHHHHHTTcEEEEEEccTTccccHHHHHHHHTcTTEEEEEEEcEETTTTEEccHHHHHHHHHHTTcEEEEEcTTTcTTccccTTTTTccEEEEETTcTTccccccEEEEEcHHHHHHHHHcTTcccccGGGcTTcHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHTHTTcEEcccTTcccccEEEEEccTTccHHHHHHHHHHTTEEcEEcTTEEEEEccccccHHHHHHHHHHHHHH PSIPRED ccHHHHHHccccccEEEEEccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccccEEEEEccHHHHHHHHHHccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEcccccccHHHHHHHcccccEEEEEEcccccccEEccHHHHHHHHHHcccEEEEccccccccccccHHHccccEEEEEccccccccccEEEEEEcHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccEEEEccccHHHcccEEEEEcccccHHHHHHHHHHcccEEEccccEEEEEccccccHHHHHHHHHHHccc //