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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58135.1
DDBJ      :             3-oxoacyl-[acyl-carrier-protein] synthase II
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  867/915 : Eukaryota  187/199 : Viruses  0/175   --->[See Alignment]
c.95.1
:415 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->390 1b3nA PDBj e-128 61.3 %
:RPS:PDB   5->415 2byzA PDBj 4e-85 34.7 %
:RPS:SCOP  5->255 1dd8A1  c.95.1.1 * 6e-77 32.5 %
:RPS:SCOP  254->414 1b3nA2  c.95.1.1 * 7e-35 56.2 %
:HMM:SCOP  4->253 1e5mA1 c.95.1.1 * 4.2e-81 43.6 %
:HMM:SCOP  215->415 1tqyA2 c.95.1.1 * 6.4e-69 44.5 %
:RPS:PFM   6->248 PF00109 * ketoacyl-synt 1e-29 36.6 %
:RPS:PFM   277->369 PF02801 * Ketoacyl-synt_C 1e-13 47.3 %
:HMM:PFM   5->248 PF00109 * ketoacyl-synt 1.2e-62 33.6 232/253  
:HMM:PFM   256->370 PF02801 * Ketoacyl-synt_C 9.1e-42 44.3 115/119  
:BLT:SWISS 2->391 FABF_VIBCH e-133 64.3 %
:PROS 156->172|PS00606|B_KETOACYL_SYNTHASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58135.1 GT:GENE ABA58135.1 GT:PRODUCT 3-oxoacyl-[acyl-carrier-protein] synthase II GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(1856719..1857966) GB:FROM 1856719 GB:TO 1857966 GB:DIRECTION - GB:PRODUCT 3-oxoacyl-[acyl-carrier-protein] synthase II GB:PROTEIN_ID ABA58135.1 GB:DB_XREF GI:76883454 InterPro:IPR000794 LENGTH 415 SQ:AASEQ MLSDKRVAVTGLGIVCPVGVDVEGSWANLLAGKSGIGPITGFDVTNFPVRFGGAVKGFEIGDYLPLKDARKMDPFIHYGIAAARQALEDSGLEINEANATQVGVAIGSGIGGLHGIELGHNAYLQGGPRRISPFFVPSNIINMIAGNLSILYGMKGPNIAIVTACTTGTHNIGEAVRIIQRGEAKVMIAGGAEMATSPTGLGGFASARALSTRNEEPETASRPWDKDRDGFVLSDGAGVLVLEELEHAKRRGAQIYAEVVGFGMSADAYHMTQPPRNGEGAARCMMNALKDAHINGEEIDYINAHGTSTPAGDRAETLAIKAVLGSHAQKTPVSSTKSMTGHLLGAAGGIEAIFSVLAIRDQIAPPTINIFNLDPECKGLDYVPNIAREMKIKTVVSNSFGFGGTNGSLIFRQLE GT:EXON 1|1-415:0| BL:SWS:NREP 1 BL:SWS:REP 2->391|FABF_VIBCH|e-133|64.3|389/414| PROS 156->172|PS00606|B_KETOACYL_SYNTHASE|PDOC00529| SEG 102->120|vgvaigsgigglhgielgh| SEG 397->408|snsfgfggtngs| BL:PDB:NREP 1 BL:PDB:REP 5->390|1b3nA|e-128|61.3|385/411| RP:PDB:NREP 1 RP:PDB:REP 5->415|2byzA|4e-85|34.7|401/405| RP:PFM:NREP 2 RP:PFM:REP 6->248|PF00109|1e-29|36.6|232/245|ketoacyl-synt| RP:PFM:REP 277->369|PF02801|1e-13|47.3|93/118|Ketoacyl-synt_C| HM:PFM:NREP 2 HM:PFM:REP 5->248|PF00109|1.2e-62|33.6|232/253|ketoacyl-synt| HM:PFM:REP 256->370|PF02801|9.1e-42|44.3|115/119|Ketoacyl-synt_C| RP:SCP:NREP 2 RP:SCP:REP 5->255|1dd8A1|6e-77|32.5|249/253|c.95.1.1| RP:SCP:REP 254->414|1b3nA2|7e-35|56.2|160/161|c.95.1.1| HM:SCP:REP 4->253|1e5mA1|4.2e-81|43.6|250/250|c.95.1.1|1/1|Thiolase-like| HM:SCP:REP 215->415|1tqyA2|6.4e-69|44.5|200/205|c.95.1.1|1/1|Thiolase-like| OP:NHOMO 4170 OP:NHOMOORG 1054 OP:PATTERN -------------------------------------------------------------------- 2371K2333331-1EDDJJ-JDCCS9JIJJJDFDCD74562OFO1111121123211411NI21S5SYHV31111111-1112111111114111111-257553J66241111111111111111111211111122255111J346456691111222211322ECBV51111111111111111111121N1111111121111111211471121114111111111A3111111111111111111112-111111-1-11111111111111122211111241111111111111111111111111111111111111431111111111M1551111112--1211211311111111111111318222233333754333344633333333333333-4464654447425668446555554853253433333441111111113322213111111111111111111111111111111211112221453342FD99B83345DDDD2H564222312568123324336632331223412222221223225143251243142221353633B463313aM331321111111111111111111111333432275335466666566666666666661-22221111111B293243255A288322-522222323353522222433483BA422222222222222225223222221747567656565112434333766742B4611113111111133111441132214A44358D76352622879411111111234481222224644443333333322222212--1111--------1-1-------------------------11111111111A2 1152fr3-311-1127DD8RGIMRdVU222443KM86BAC79B344JFENECEBB8SME878111111-1111112111111111121-223D112----114111-162L33243-2121122412215A2-1211111222411212-31142422121229817547A54872345*73589845AG473351223 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 415 STR:RPRED 100.0 SQ:SECSTR ccccccEEEEEEEEEcTTcccHHHHHHHHHHTcccEEEcHHHHHTTccccEEEcccccccTTcccHHHHTTccHHHHHHHHHHHHHHHHHTccHHHHTTcTTEEEEEEcccccHHHHHHHHHHHTcTHHHHcccHHHHHcTTHHHHHHHTTTTccccEEccccGGGHHHHHHHHHHHHHHTTcccEEEEEEEEcccHHHHHHHHHTTTcccccTTcGGGTccTTcTTccccccccEEEEEEEEEHHHHHHTTccccEEEEEEEEEEcccccccccTccHHHHHHHHHHTTTcccccccccEEEccccccHHHHHHHHHHHHHHHTTccGGcEEEcTHHHHcccGGGHHHHHHHHHHHHHHHTEEccccccccccGGGTcccccccccEEccccEEEEEEEETTTEEEEEEEEccc DISOP:02AL 1-2| PSIPRED ccccccEEEEEEEEEccccccHHHHHHHHHccccccccccccccccccccEEEEcccccHHHcccHHHHHHccHHHHHHHHHHHHHHHHccccHHHcccccEEEEEEcccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHccccccccccccccccccccccccEEEEccEEEEEEEcHHHHHHcccEEEEEEEEEEEEccccccccccccHHHHHHHHHHHHHHHcccHHHccEEEEccccccccHHHHHHHHHHHHcccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHccEEcccccccccccccccccccccccccccccEEEEEccccccEEEEEEEEEcc //