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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58159.1
DDBJ      :             ABC transporter, ATPase subunit
Swiss-Prot:             

Homologs  Archaea  24/68 : Bacteria  859/915 : Eukaryota  195/199 : Viruses  1/175   --->[See Alignment]
b.40.4c.37.1e.26.1
:557 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   22->125,160->241,303->532 2ix3A PDBj 6e-13 28.0 %
:RPS:PDB   14->551 3cmvA PDBj 2e-37 9.5 %
:RPS:SCOP  17->57 2vnuD1  b.40.4.5 * 1e-06 15.6 %
:RPS:SCOP  36->540 1mjgM  e.26.1.3 * 4e-26 7.5 %
:HMM:SCOP  6->248 1e69A_ c.37.1.12 * 8.2e-48 32.2 %
:HMM:SCOP  212->382 1pujA_ c.37.1.8 * 0.00014 20.3 %
:HMM:SCOP  329->522 1ii8.1 c.37.1.12 * 7.3e-50 31.4 %
:RPS:PFM   46->177 PF00005 * ABC_tran 1e-05 23.6 %
:RPS:PFM   365->475 PF00005 * ABC_tran 1e-06 39.4 %
:HMM:PFM   46->193 PF00005 * ABC_tran 2.4e-21 43.4 106/118  
:HMM:PFM   365->475 PF00005 * ABC_tran 1.9e-18 29.2 106/118  
:HMM:PFM   340->383 PF03193 * DUF258 0.00037 23.3 43/161  
:BLT:SWISS 2->553 Y1252_HAEIN 0.0 70.2 %
:PROS 165->179|PS00211|ABC_TRANSPORTER_1
:REPEAT 2|123->249|406->532
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58159.1 GT:GENE ABA58159.1 GT:PRODUCT ABC transporter, ATPase subunit GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION complement(1888053..1889726) GB:FROM 1888053 GB:TO 1889726 GB:DIRECTION - GB:PRODUCT ABC transporter, ATPase subunit GB:PROTEIN_ID ABA58159.1 GB:DB_XREF GI:76883478 InterPro:IPR001687 InterPro:IPR003439 InterPro:IPR003593 LENGTH 557 SQ:AASEQ MAQYVYSMNRVGKVVPPKRVILRDISLSFFPGAKIGVLGLNGAGKSTVLKIMAGIDKDIEGEAIPQKGLKIGYLSQEPHLDPAKNVRDNVEEGIAETKAMLERFNEIGLLFAEPMSDEEMNRLFEEQAQLQDAIEAADAWNLDHKLDIAAEALRLPPWEAEVTHLSGGEQRRVSLCRLLLSEPDMLLLDEPTNHLDAESVAWLERYLEKYPGTVVAVTHDRYFLDNVAGWILELDRGHGIPWEGNYSSWLEQKEKRLQLEEKQEGARIKAIKAELEWVSVNPKGRHAKSKARLARFEELSSQEYQKRNETNEIYIPPGPRLGDIVIEAKDLRKSFGDRLLIDELNFSLPPGGIVGIIGANGAGKTTLFRMMVGQEQPDAGEIRLGDTVKLAYVDQGREALNASKTVWEEISEGQDIIKVGAYETPSRAYVARFNFKGSDQQKRIGDLSGGERNRVHLAKLLRAGGNVLLLDEPTNDLDVETLRALEQALLGFPGCAVVISHDRWFLDRIATHILAFEGDSQVIWFEGNHADYEANRRQRLGEMADQPHRIRYQPLFS GT:EXON 1|1-557:0| BL:SWS:NREP 1 BL:SWS:REP 2->553|Y1252_HAEIN|0.0|70.2|550/556| PROS 165->179|PS00211|ABC_TRANSPORTER_1|PDOC00185| NREPEAT 1 REPEAT 2|123->249|406->532| SEG 178->191|lllsepdmllldep| SEG 250->264|leqkekrlqleekqe| SEG 351->363|ggivgiigangag| BL:PDB:NREP 1 BL:PDB:REP 22->125,160->241,303->532|2ix3A|6e-13|28.0|398/972| RP:PDB:NREP 1 RP:PDB:REP 14->551|3cmvA|2e-37|9.5|529/1190| RP:PFM:NREP 2 RP:PFM:REP 46->177|PF00005|1e-05|23.6|99/123|ABC_tran| RP:PFM:REP 365->475|PF00005|1e-06|39.4|104/123|ABC_tran| HM:PFM:NREP 3 HM:PFM:REP 46->193|PF00005|2.4e-21|43.4|106/118|ABC_tran| HM:PFM:REP 365->475|PF00005|1.9e-18|29.2|106/118|ABC_tran| HM:PFM:REP 340->383|PF03193|0.00037|23.3|43/161|DUF258| GO:PFM:NREP 4 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 2 RP:SCP:REP 17->57|2vnuD1|1e-06|15.6|41/95|b.40.4.5| RP:SCP:REP 36->540|1mjgM|4e-26|7.5|492/728|e.26.1.3| HM:SCP:REP 6->248|1e69A_|8.2e-48|32.2|239/308|c.37.1.12|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 212->382|1pujA_|0.00014|20.3|143/273|c.37.1.8|2/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 329->522|1ii8.1|7.3e-50|31.4|191/370|c.37.1.12|2/2|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 4892 OP:NHOMOORG 1079 OP:PATTERN --------1------1-1-----421112-21212------------1--1---1111111-----1- 345-654855534473333-362235333333755599661546654555536664561155547667883433343345631--2--6666-6331-1346544566151111111111111142223222223223353211513222113133333323322132242122211121242334--1-223799B9AA9A7BAA9CA748878AB922497675555567C533333333333333633546554774644766336653434355555585465887777787797755556555555557775557775-886A666778787658554544C53263462-993511111-232--336-435552232255667444554464444444444B-455645444542A775887897974533454433343445555555544543658----------322245125221221-----2543346645555555555554486555566558547612444334433355445544343544443444433545A2537343433445266776685555757732424332222221111111113311333584454555554556555555554565565--333331--11177674846665655655-6565556555655445446A9A874675655555555555554655545554-645668766666--341211145444485743343433434343365435334345455455565444464666312233331545585555566765564333433333332242554444111111113121---1-11121--756111-21---22211-1----42 1211446-73314465533444536354445455555544544433434444453353544434544444444545525544444444-5655555434353466914V54553347331323233353XV5-33712-1323342322142162322338835343433D33443ABG*CAA46A4BC455CC9776B ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--- DISOP:02AL 279-314, 539-551| PSIPRED ccccEEEEEEEEEEEcccEEEEEccEEEEccccEEEEEccccccHHHHHHHHHccccccccEEEEccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccHHHccHHHcccHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHccEEEEEEccHHHHHHHccEEEEEEccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEcccccccccEEEEEEEEEEEccEEEEEccEEEEccccEEEEEccccccHHHHHHHHHccccccccEEEEccEEEEEEEEccHHHccccccHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHcccHHHccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHccccEEEEEcHHHHHHHHccEEEEEEcccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccc //