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Nitrosococcus oceani ATCC 19707 (noce0)
Gene : ABA58176.1
DDBJ      :             Response regulator receiver
Swiss-Prot:             

Homologs  Archaea  13/68 : Bacteria  425/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.23.1
:139 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->137 1jlkB PDBj 2e-44 60.0 %
:RPS:PDB   1->44 1a04A PDBj 5e-04 18.2 %
:RPS:PDB   31->124 3cwoX PDBj 1e-15 16.5 %
:RPS:SCOP  1->126 1a0oA  c.23.1.1 * 1e-21 27.1 %
:HMM:SCOP  1->126 1k68A_ c.23.1.1 * 1.7e-27 31.0 %
:RPS:PFM   3->120 PF00072 * Response_reg 4e-11 36.4 %
:HMM:PFM   3->122 PF00072 * Response_reg 7.8e-24 30.0 110/112  
:BLT:SWISS 3->137 RCP1_SYNY3 5e-44 60.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABA58176.1 GT:GENE ABA58176.1 GT:PRODUCT Response regulator receiver GT:DATABASE GIB00281CH01 GT:ORG noce0 GB:ACCESSION GIB00281CH01 GB:LOCATION 1907318..1907737 GB:FROM 1907318 GB:TO 1907737 GB:DIRECTION + GB:PRODUCT Response regulator receiver GB:PROTEIN_ID ABA58176.1 GB:DB_XREF GI:76883495 InterPro:IPR001789 LENGTH 139 SQ:AASEQ MEILLVEDNPGDVRLTQEAFKEAKIQNQLYVVEDGVAAMEFLHQQGQYADVPRPHLILLDLNLPKKDGREVLREIKQNSALKRIPVVVLTTSGDKKDILISYDLHANCYITKPVELDQFIQIAKSIDNFWLTTVSLPGE GT:EXON 1|1-139:0| BL:SWS:NREP 1 BL:SWS:REP 3->137|RCP1_SYNY3|5e-44|60.0|135/147| BL:PDB:NREP 1 BL:PDB:REP 3->137|1jlkB|2e-44|60.0|135/139| RP:PDB:NREP 2 RP:PDB:REP 1->44|1a04A|5e-04|18.2|44/205| RP:PDB:REP 31->124|3cwoX|1e-15|16.5|85/236| RP:PFM:NREP 1 RP:PFM:REP 3->120|PF00072|4e-11|36.4|107/111|Response_reg| HM:PFM:NREP 1 HM:PFM:REP 3->122|PF00072|7.8e-24|30.0|110/112|Response_reg| GO:PFM:NREP 3 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| RP:SCP:NREP 1 RP:SCP:REP 1->126|1a0oA|1e-21|27.1|118/128|c.23.1.1| HM:SCP:REP 1->126|1k68A_|1.7e-27|31.0|126/0|c.23.1.1|1/1|CheY-like| OP:NHOMO 936 OP:NHOMOORG 440 OP:PATTERN -----------------------12----1-1--1--------22--122321--------------- 237-1----------11----2--11-----111111----522-1-----------1----2-3---221-----------3--1111132-2-------511194A21-------------------1--1-1-4442411-5-C7AD554-222------3453A9A2------------J661112--1-222222221222222------224---11-111111123-11111111111111-1111-1-11111111221122--1---111-1--------------------------------1---------331-52222122-3-2-1111111141-211-3334111111111131---652--2-------22311123333------------11311124111--11222-22211112-3---111113111111111-11115-2---1------------------------1------11111333333322222244222213333-1-1--2213-1--1171--1122122-----------5342156131211141131987364615--1-1415--------------------14-2------3-62-2111111121-222211--213---3-31--------1-----------------------------------------------------------------------------------------2212-23-1---------------2222212112-322121--1311111211-----1------1--------1113223233222-111--3---2222------------------------------------1----111-1-51 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 139 STR:RPRED 100.0 SQ:SECSTR ccEEEEcccHHHHHHHHHHHHHHcTTcEEEccccccTTHHHHHHHHHHHHHHccccEEEEcccTTccHHHHHHHHHHHcTTccccEEEEccccTHHHHHHHHHTTccEEEEcHHHHHcTHHHHHHHHHHHTTTccccHH DISOP:02AL 137-139| PSIPRED cEEEEEEccHHHHHHHHHHHHHcccEEEEEEEccHHHHHHHHHHcccccccccccEEEEEcccccccHHHHHHHHHHccccccccEEEEEccccHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHHccccccccc //